Gene Tmz1t_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2873 
Symbol 
ID7873775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3110595 
End bp3111794 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID643699794 
Producthypothetical protein 
Protein accessionYP_002889849 
Protein GI237653535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA AGCTTTCCAG CCACCGCCGC ACCCGACCCG CCACCACCGC CCTGCTGCCG 
TCGGCGCTCG GCGCCGCGCT GCTCGCGCTC GCCGCCACGC CGGCCCAGGC GATCGGGTTT
TCGCAGGGCG ACGCCACGCT CGACATCAAC GGCACGGTCA ACGGCTTCTA TTCTCATCGG
ACCGAGGAGC GCGCGGGCGT CAAGACCACC GACTCCGCGC TCACCAACGG CTTGCTGCCG
GGCTGGATCA ACTTCGTGTT CACCACCAAG GTGGAGGGCC TGGACATCAA GGCTCACGTC
GGCTTCGCGC CCGGCATCAA CGACAAGTCG GACGTGGTGG GCCTGCCCAG CGACCCCAGC
TGTGGCGGTT CCACCGGCTG CGACAGCCCC TTCACCCAGA TCGACACCCG CAACCTGTAT
TTCCAGTTCG GCAACACCGA GTGGGGCACG GTCAAGTTCG GCCGCGACAT CGGCCTCTTC
GGGCAGAAGA TCATCCTGTC CGACATGACG CTCCTCGGCC TCGGCGGCAA CAGCTACGCG
TCGACGCCCT TCAACACCAC CTTCGGCATG ATCGGCCACG GCTACATGTA CACCGGCTTC
CAGCCCCAGA TCACCTACAC CACGCCGGCC TTCGGCGGCT TCTCGGCCTC GGCGGGGATC
TTCGATCCCA GCAAGTTCGC CGGTGACGAG ACCAAGGACC CCGGCTTCCA GGCGATGGCG
AACTACGACT GGAAGGCCGG CACGGCCAAG GGCTCGGTGT GGGCGGGTGC GGTCCACCAG
CGCACCAGCG GCGCAGGCAG CTTCAACGCC AACGGCTTCG AGCTCGGCGC GAAAGTCGGC
ATCGGCGCCT TCGAGGCCGT CGCCTACGGC TTCGACGCCA GCGGGCTGGG CCTGTCGACG
GTCGGTGCGC TGTACCTGTC GCCCTTCGGC AAGACCGACG GCAAGGGCTA CTTCGTGCAG
GGCACCTACA CCGTGGGCAA GACCAAGTTC GGAATCAACT TCGGCGAGAA CCGCGACAGC
GGCGGCGCGC TGGCCGACAC CAACAAGTTC CGCTCCGCCA CCGTCGGCGT GTATCACAGC
CTTAACAAGT ACATCACCCT GGTGGGCGAA TACAACCAGG AGAGGGGCGA TGGCGACGAC
CTGTTCGCGG GTGACCTGAA GACCCGGACC ATCTCGCTGG GCGGCATCAT CATGTTCTGA
 
Protein sequence
MQNKLSSHRR TRPATTALLP SALGAALLAL AATPAQAIGF SQGDATLDIN GTVNGFYSHR 
TEERAGVKTT DSALTNGLLP GWINFVFTTK VEGLDIKAHV GFAPGINDKS DVVGLPSDPS
CGGSTGCDSP FTQIDTRNLY FQFGNTEWGT VKFGRDIGLF GQKIILSDMT LLGLGGNSYA
STPFNTTFGM IGHGYMYTGF QPQITYTTPA FGGFSASAGI FDPSKFAGDE TKDPGFQAMA
NYDWKAGTAK GSVWAGAVHQ RTSGAGSFNA NGFELGAKVG IGAFEAVAYG FDASGLGLST
VGALYLSPFG KTDGKGYFVQ GTYTVGKTKF GINFGENRDS GGALADTNKF RSATVGVYHS
LNKYITLVGE YNQERGDGDD LFAGDLKTRT ISLGGIIMF