Gene Tmz1t_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2826 
Symbol 
ID7873234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3060461 
End bp3061681 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID643699747 
Productprotein of unknown function DUF214 
Protein accessionYP_002889802 
Protein GI237653488 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.663211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGT GGATGCCCTT CGAATGGATC GCCGCGCTGC GCTTCCTGCA GGAGGGACGC 
ATGCAGTCGC TGCTGATCAT CGTCGGCGTC GGCGTCGGCG TGGCGGTGAT CGTGTTCATG
TCGGCGCTGC TGTCCGGTCT GCAGGCCAAC CTGGTGCGCC GCACGCTCAG TTCGCAGGCG
CACATCGTGC TGCTGCCGGC CGAGGAGGTG GCGCGCCCGC AGGCCTCGAG CGGGCACGAC
GCGATCCGCC TGCAGAAGCA GGCGCAGCGG CTGCGCTCGA TCGACCAGTG GCAACTGCTG
CGCGACCGCC TCGAGGCCTG GCCCGAGATC GCCGCGGTGT CGCCGGCCGC CTCCGGCCCG
GCGTTCGCGG TGCGTGGCGA CGCCAGCAAG GCGGTGACCC TGCTCGGCAT CGAACCCGCG
CGCTACCAGC AGGTCATCGA CCTCGGCGGA CGCATCACCG CCGGCGAGCT GCGCGTCGGC
GCCGGCGAGG CGGTGATCGG CATCGAGCTG GCCAAGGACC TCGGCGCCGA CGTCGGCGAC
AAGCTGCGCA TCCGCGGCGC GCAGGGCGAG GCCGAGACGC TGACCGTGAC CGGGCTGTTC
GATCTCGGCA ACAAGGGCGT CAATGCACGC AACGTCTATG TCGGCCTGCG CACCGGTCAG
ACCCTGCTCG ACCTGGTCGG CGGCGTCTCC AACATCGACC TCGCCCTCCA CGACCTCGAC
CTCGCGGAGG ACGTGGCGCA GCGCATCGCC GCCGAGTCCG GCCTGATCGC CGACAGCTGG
ATCCGCACCA ACGCGCAGTT CGTCACCGCG CTCACCTCGC AGCGGGTGTC GAGCAACGTG
ATCCGCTTCT TCATCGCGCT CTCGGTGTCC TTCGGCATCG CCAGCGTGCT GGTGGTGTCG
GTGGTCCAGC GCAGCAAGGA GATCGGCATC CTGCGGGCGA TGGGCGCCAC GCAGGCGCAG
ATGCGGCGCA TCTTCCTGCT GCAGGGCGGC ATCGTGGGTT TCCTCGGATC CTTCCTGGGC
TCGGCGCTGG CGTGGGCCTT CCTGATGCTG TGGCGGATGC TCGCGCGCAA CCCGGACGGC
ACGCCGCTGT TCGACATCGG CGTCGAGCCC GCGCTGGTGG CGATCGCCGC GGGCGGCGCC
AGCGTGGTCG GCATCCTCGC GGCGCTGCTG CCGGCACGGC GTGCGGCAGG GCTCGACCCG
GTGGTGGCGA TCCGTGGCTG A
 
Protein sequence
MKSWMPFEWI AALRFLQEGR MQSLLIIVGV GVGVAVIVFM SALLSGLQAN LVRRTLSSQA 
HIVLLPAEEV ARPQASSGHD AIRLQKQAQR LRSIDQWQLL RDRLEAWPEI AAVSPAASGP
AFAVRGDASK AVTLLGIEPA RYQQVIDLGG RITAGELRVG AGEAVIGIEL AKDLGADVGD
KLRIRGAQGE AETLTVTGLF DLGNKGVNAR NVYVGLRTGQ TLLDLVGGVS NIDLALHDLD
LAEDVAQRIA AESGLIADSW IRTNAQFVTA LTSQRVSSNV IRFFIALSVS FGIASVLVVS
VVQRSKEIGI LRAMGATQAQ MRRIFLLQGG IVGFLGSFLG SALAWAFLML WRMLARNPDG
TPLFDIGVEP ALVAIAAGGA SVVGILAALL PARRAAGLDP VVAIRG