| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2820 |
|---|
| Symbol | |
|---|
| ID | 7873228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3049247 |
|---|
| End bp | 3049720 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643699741 |
|---|
| Product | Sel1 domain protein repeat-containing protein |
|---|
| Protein accession | YP_002889796 |
|---|
| Protein GI | 237653482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCTC TCGTTGCACG ATTGTTGACC GCCTGGATCA TTGCACAGGC GCCCGGCGCG
GCGCACGCGC TCGAACCCGA GGAGCTCGAC GCGCTGGTGG CGCGGCCCAG CATCGGCCTC
TACAAGGCCT ACGCCGAATT CAAGATGGCG CGCTACGGCA GCGCGCGCGA GATCTGGAGC
GCGCTCGCGC AGGCCGGCGT GGCGGAGGCC TGGTTCCACC TCGGCATCCT CGCCGAGGAT
GGCCTGGGCG AGCCGCGCGA CGCCGCCGCG GCGCTGGAGC GCTACCGCCG CGGCGGCGAG
GCCGGCTCCA GCAAGGCGCA GTACCGGCTC GGCCTGCTCC ATCTCGAGGG CCGCCTGGTG
CCGGCCGATC CGGTGCAGGC GCGCTACTGG CTGGCGGTGG CCGCTGCCAA CGGCGACGAG
GAGGCCGCAC GCCGGCTCGC CACGTTGCCC GCGTCGATCC CCGCCGCGCG CTGA
|
|---|
| Protein sequence | MRPLVARLLT AWIIAQAPGA AHALEPEELD ALVARPSIGL YKAYAEFKMA RYGSAREIWS
ALAQAGVAEA WFHLGILAED GLGEPRDAAA ALERYRRGGE AGSSKAQYRL GLLHLEGRLV
PADPVQARYW LAVAAANGDE EAARRLATLP ASIPAAR
|
|---|
| |