Gene Tmz1t_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2584 
Symbol 
ID7873325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp2790075 
End bp2790716 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID643699507 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_002889563 
Protein GI237653249 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGC TCTCTCGCCT GAAGAACGCC CGCGGCAACC AGCCGCCGCT GAGCGCCGAG 
GCCGAGCGCG CGCTCGAGGC TTGGCATGCG CTCGCCGAGT CCGCGCACGA ACAGCCTCAT 
TTCGAGTCGC GCTACGTGGT GCTCAACACC GAGGCCACCG GCCTCGACCT CGAACGCGAC 
CGCCTGCTCG CGGTCGGCGC CATCGCCGTC GACGGCGGCC TGCTGCACCC GCAGGACGCC 
TATCACGCGC AGCTCGAGCC CTTGCCCGGC GATGCGCTCG CCGGGCTGCT CGGCTTCGCC 
CGCAACAGCC CGCTTGTCGT GTTCAACGCC ACCTTCAACC GCACGATGCT CGAGCGCGCG 
TTCTCGAGAA TGCTCGGCTT CACGCCGGAG TTCCTCTGGA TCGACCTCTA TTTCCTGCTG 
CCCTCGCTGT TTCCCGAGCG GCTGGAACGC CCCGGTCGGC TCGCCGACTG GATGGCCGCC 
TTCGAGATCG AGACCTTCCA GCGCCACCAC GCGCTCGGCG ACGCCTGGGC GATCGCGCAA 
CTCTTCCTCG CGGCGCAGTC GCGCGCACTC TCGCTCGCGG TCACCAGTCC GCGCGCGCTT 
GCCGAGCACG CCCAGGCCTA CCGGCAAAAG ATCAAGGTCT GA
 
Protein sequence
MSWLSRLKNA RGNQPPLSAE AERALEAWHA LAESAHEQPH FESRYVVLNT EATGLDLERD 
RLLAVGAIAV DGGLLHPQDA YHAQLEPLPG DALAGLLGFA RNSPLVVFNA TFNRTMLERA 
FSRMLGFTPE FLWIDLYFLL PSLFPERLER PGRLADWMAA FEIETFQRHH ALGDAWAIAQ 
LFLAAQSRAL SLAVTSPRAL AEHAQAYRQK IKV