| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2520 |
|---|
| Symbol | |
|---|
| ID | 7873959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2719398 |
|---|
| End bp | 2720294 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643699442 |
|---|
| Product | protein of unknown function DUF477 |
|---|
| Protein accession | YP_002889499 |
|---|
| Protein GI | 237653185 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC AGCTCTGGCG CGCGCTGCTG ACGCTCGCCG CACTGTTCGC GACCGGGCTG
GCGCTTGCCC AGCCGCTGCA GCCGGTGCCG GCACTGCAGG CGCGTGTGAC CGACCTCACC
GCAACGCTGT CGGCGGCGCA GGTGCGCGCG CTCGAGGGCA AGCTCGCCGC CTTCGAGGCC
GCGCATGGCA GCCAGATCGC CGTGCTGCTC GTGCGCAGCA CCACGCCCGA GGATATCGCC
GCCTACGCCT TCCGTGTCGC GGATGCCTGG AAGATCGGCC GTCGCGAGGT GGGCGACGGC
GTGCTGCTGC TGGTGGCGAA GGACGACCGC AAGGTGCGCA TCGAGGTCGC CCGTGCGCTC
GAGGGCGCGA TCCCCGACCT CGCCGCCCGG CGCATCATCG ACGGCGCGAT CACGCCGGCC
CTCCGCCGTG GCGACTTCGC CGGCGGCATC GACGCCGGTG TGGGAGGCCT GTCCGCGCTG
ATCCGCGGCG AGAACCTGCC TGCGCCGGAA CCCGCCGCAC GCGGCGGCGG AGGCGCCGGC
ATCGAGGACC TCGGCGCCCT GCTTTTCGTC GGCGTGCCGA TTCTCGGCGC GGTGCTGGTG
GGCATGCTCG GGCGCAAACC CGGGGCCTTC GCGACGGGCG CCGTCACCGG GCTCATCGTG
CATCTGCTTA CCGCCAGCCT CTTTCTCGCC CTCGTCGGCG GCGTGCTCGC CGTGGTCTTC
GTGCTCGCGC TCGGCATCGG CGGCGGCGGT CGCGGCGGTC CGCCGCATCG CGGCGGAGGG
CCGGTCATCC GCGGCGGCAG CCTCGGCGGC CTGGGCGGCG GCAGGCTCGG GGGTGGCGGG
TTCCGTTCCG GCGGCGGAGG CAGTTTCGGT GGCGGCGGCG CCTCGGGGAG CTGGTGA
|
|---|
| Protein sequence | MAQQLWRALL TLAALFATGL ALAQPLQPVP ALQARVTDLT ATLSAAQVRA LEGKLAAFEA
AHGSQIAVLL VRSTTPEDIA AYAFRVADAW KIGRREVGDG VLLLVAKDDR KVRIEVARAL
EGAIPDLAAR RIIDGAITPA LRRGDFAGGI DAGVGGLSAL IRGENLPAPE PAARGGGGAG
IEDLGALLFV GVPILGAVLV GMLGRKPGAF ATGAVTGLIV HLLTASLFLA LVGGVLAVVF
VLALGIGGGG RGGPPHRGGG PVIRGGSLGG LGGGRLGGGG FRSGGGGSFG GGGASGSW
|
|---|
| |