Gene Tmz1t_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2238 
Symbol 
ID7083670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2522202 
End bp2522585 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content66% 
IMG OID643699257 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002355873 
Protein GI217970639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4101] Predicted mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0230076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAG TGCAAGCGAT ACGACCGGAC CGTGAAGTCC TGACGCGTCA GCGGCTGCCG 
TATTTCATCG GGATCTCGGG GCAGACGGTC GGGGCAAGCG GGCTGAGCAT GCATCTGGTG
ACGATCCCGC CCGGGGCCCG GTCGGAGCCG CATGTCCACG TCGGCTACGA AACCGGAATC
TATGTGCTCG AAGGCAGGGT CCTGACGCGC TGGGGCGCGA AGCTGGAAAA TGAGGTGATC
AGCGCGGCGG GGGAGTTCCT GTTCGTTCCG GCGGGGGTTC CCCACGAGGC GATCAATCTC
AGCGCCACTG AAGCGGCGCG CGCGGTGGTG GCCCGCAACC ATCCGGCAGA GCAGGACCAG
GTTCAGCCCT ACGTTGCCGG GTAG
 
Protein sequence
MKQVQAIRPD REVLTRQRLP YFIGISGQTV GASGLSMHLV TIPPGARSEP HVHVGYETGI 
YVLEGRVLTR WGAKLENEVI SAAGEFLFVP AGVPHEAINL SATEAARAVV ARNHPAEQDQ
VQPYVAG