Gene Tmz1t_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2198 
Symbol 
ID7085551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2481913 
End bp2482371 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID643699218 
Productresponse regulator receiver protein 
Protein accessionYP_002355834 
Protein GI217970600 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.718868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCG AAAGACCGAT CCTGCTGGTC GAGGACAATC CGGACGACGA GGCGCTGACG 
CTCCACGCCC TGTCGCGCAA CCGCATCACC AGCCCGGTGG TGGTGGCGCA CGACGGCGTG
GAGGCGGTGG AGTACCTGTT CTCGACCGGG AGTCGCGCGG GACAGCCGCT GCCGCCGCTG
CCGGCGGTCG TGCTGCTCGA CCTCAAGCTG CCGCGCATCG ACGGCCTGGA GGTGCTGCGC
CGCATCCGCG CCGACCAGCG CACGGCGCTG CTGCCGGTGG TGGTGCTGAC CACCTCGCGG
GAGCCGCTCG ATCTCGCCCA GGCCTACCGC CTCGGAGCGA ACAGCTACAT CCGCAAGCCG
GTGGATTTCG ACCGCTTCGA GCGCGCGATC GGCCTGATCG GGCACTATTG GCTGGAACTC
AACGAGTCCA CCGAAACGGT CGCGCGCGGG GCGTATTGA
 
Protein sequence
MASERPILLV EDNPDDEALT LHALSRNRIT SPVVVAHDGV EAVEYLFSTG SRAGQPLPPL 
PAVVLLDLKL PRIDGLEVLR RIRADQRTAL LPVVVLTTSR EPLDLAQAYR LGANSYIRKP
VDFDRFERAI GLIGHYWLEL NESTETVARG AY