| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2116 |
|---|
| Symbol | |
|---|
| ID | 7085386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2394779 |
|---|
| End bp | 2396302 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643699135 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002355752 |
|---|
| Protein GI | 217970518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.539609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCAA CGATCGGAAA ACTCGTCGGA GACAACCTCT ACATTCACCG GCAATGCCTC
GATTACCTCC CAGACGAGTT GGGAGAGACG ATCACTCAAG CTCGGCATGC TTCGGCGGAA
GCCTTCGAGT TGGCAGACGT CTTCAAGATC GGGACTTCCA ACCGCACGGT CTCCCTCCTT
CGCTATCCGT CCTTCTTCGA GGATCCCTTC CCCACCTTGG CGGAGAGCCG GCGCATCCAT
CTCGATGGCG ATCGAGTCAG CTATCGCTCG TATGCCGAGT CACTCAACCC ACCCATCTTG
CACAGGAAGG AACTCCTCCT TCCGCCCAAC CACCCGGACC GCGAAGCCTT CGCCACGCTC
ACTGCCCAAG CTGAGCAGCT TGGGCTGTTT CGTGACAATC ACCTGATCGG TTTCAAGCGC
ACGTGGGAGG AGAAGATACG CGCAGCCGGG TATTACCTCG ATGGCCACAC CCTCCTCCCG
GTAGGTAACG AAGTCTCCGA GGCAGAGCAA GGCGACACGC TCGACACAAC GGCAGCGGAG
ATCCAACGAC ACCGCACCGC ATTAAGTCGA GCGGGCCTCT CCGCCCCGAT GCAGGCCCTT
GCTCGCCACG GCCTGCTCGG CGAGCAAACA ACCCTGTTCG ACTACGGTTG CGGTCGTGGC
GACGACCTGA CCGCACTGCG CAGCAACGGA ATTGCAGCCA ATGGTTGGGA CCCCTACTTC
GCACCCGACC AGCAGAAGCG GCCCGCCAAG GTCGTCAACC TCGGCTTCGT CATCAACGTC
ATCGAGGACT TCGACGAGCG CATCGCCGCC CTGCGAGGTG CATTCGAACT TGCAGAAGAA
CTGCTCGTCG TTTCGACGAT GCTTTATGGA AGCGCGCCAC CGCCCGGACA ACCCTATCGG
GATGGCTACC TGACCGGGCG TCAAACGTTC CAGAAATACT TCACCCAGAA CGAACTCAAG
GAATTCGTCG AGTCCGTTCT CGACACAGAG GTCGTCGCCG TCGGACCGGG CATCATGTTC
GTTTTCGCGG GTAAGGGTGC TGAGCAGCGA TTCCTGTACG GCCGACAACG CAGCCATCAT
GCCGTGAAGC TACTGGGCTA CCGCCGCGCG CAGGCAGTTC GCAGCCCGAG GGTGCCACGG
CCTTCCAGAC GCGAACAACA ACTCGCGGCG CATCACGACC TCATCGACGC GCTGTGGCAG
GCGATGCTGA ACCTCGGTCG CACGCCCGAG CCATTCGAGT TTGCGGACTA CGCGGCAACT
GTTGAGGCTT TCGGCTCGTG GGCGCGCGCG ACTCGATTCG TACTCGAGGT CAAGGACACC
GCAGAGTTCG AGCTCGCGGC AGCCGAGCGT CGCGCCGATC TTCTCGTGTA CCTCGCTCTC
CAGCTCTTTT CGAAGCGGAA GCGCTACAGC CACCTCGATG AAAGCCTGCA GCGCGACGTC
AAAGCGCACT TCGGCGACTA CCAGAAGGCC CCTCGCCACC GCGCAGGCGT TGCTGCTGAG
CGTCGCAGAT CCATCCACAC TTGA
|
|---|
| Protein sequence | MRPTIGKLVG DNLYIHRQCL DYLPDELGET ITQARHASAE AFELADVFKI GTSNRTVSLL
RYPSFFEDPF PTLAESRRIH LDGDRVSYRS YAESLNPPIL HRKELLLPPN HPDREAFATL
TAQAEQLGLF RDNHLIGFKR TWEEKIRAAG YYLDGHTLLP VGNEVSEAEQ GDTLDTTAAE
IQRHRTALSR AGLSAPMQAL ARHGLLGEQT TLFDYGCGRG DDLTALRSNG IAANGWDPYF
APDQQKRPAK VVNLGFVINV IEDFDERIAA LRGAFELAEE LLVVSTMLYG SAPPPGQPYR
DGYLTGRQTF QKYFTQNELK EFVESVLDTE VVAVGPGIMF VFAGKGAEQR FLYGRQRSHH
AVKLLGYRRA QAVRSPRVPR PSRREQQLAA HHDLIDALWQ AMLNLGRTPE PFEFADYAAT
VEAFGSWARA TRFVLEVKDT AEFELAAAER RADLLVYLAL QLFSKRKRYS HLDESLQRDV
KAHFGDYQKA PRHRAGVAAE RRRSIHT
|
|---|
| |