Gene Tmz1t_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2083 
Symbol 
ID7085353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp2356332 
End bp2357000 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID643699103 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_002355720 
Protein GI217970486 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.246255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATCA ATGCAGACTT CTCGCGCCCT GCTGCGCTTA CGTTCAAGGA TTACAAGTGG 
ATTGCATCGC CGCAGGCCGG CGTCGAGCGC GTGATGCTGG ACCGCGTGGG CGAGGAGCGC 
GCGCGGGCGA CCAGCATCGT GCGCTACGCC GCGGGGGCCC GATTCCCGCA TCATCAGCAT 
CCCGGCGGCG AGGAGATATT GGTGCTTTCC GGCACGTTTT CCGATGAAGA CGGGCACTAC 
CCTGCAGGCT GGTACCTGCG CAATCCCCCC GGCTCGGGTC ACCGGCCGTT CAGCGACGAG 
GGCGCCGTCA TCTTCGTCAA GCTGTGGCAG ATGCCCGGGC ATGAGACGCG TTGCGTGCGC 
ATCGACACGA ACGATCCCGC GTCGTGGCGG CGCGACGGCG AGCGCGAGAT CTGCCAGCTC 
TTTTCGGCGG ATGCGGAGCA GGTGTGCCTG CAACGCTTGA CTGGCGGGCA GGCGGTGTTG 
CCCGACCCGG TGGATGGCGC AGAACTGTTG GTGCTGGCGG GAGCGCTGCG TGCGGGCGGC 
CAGTCGTACG AGCGTGGCAG CTGGGTGCGC TTGCCCGCAG GGGCCTATCC CGAGTTTGTT 
GCCGCGGCCG AGGGCGCGAG CTTCTACCTC AAGACGGGCC ATCTGCGCGA CGTGACGGGC 
GTGGCCTGA
 
Protein sequence
MLINADFSRP AALTFKDYKW IASPQAGVER VMLDRVGEER ARATSIVRYA AGARFPHHQH 
PGGEEILVLS GTFSDEDGHY PAGWYLRNPP GSGHRPFSDE GAVIFVKLWQ MPGHETRCVR 
IDTNDPASWR RDGEREICQL FSADAEQVCL QRLTGGQAVL PDPVDGAELL VLAGALRAGG 
QSYERGSWVR LPAGAYPEFV AAAEGASFYL KTGHLRDVTG VA