| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2048 |
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| Symbol | |
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| ID | 7083808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2317393 |
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| End bp | 2319111 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643699075 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002355692 |
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| Protein GI | 217970458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.105277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCCT CTGCAGCCCC CTCCGTCGGC CCGCAGCCGG TTTCGAGCCC CGCTGCCCCC
TGGTGGAAAT CCGCCGTCGC CTACCAGCTC TACCCGCGCA GCTTCATGGA CAGCGACGGC
GACGGCATCG GCGACCTGCG CGGGATCCTC GCGCGGCTCG ACTACCTGCA ATGGCTGGGC
GTCGATGTGA TCTGGATTTG CCCGATCTTC GACTCCCCGA ACGACGACAA CGGCTACGAT
ATCCGCGACT ACCGCAAGAT CCTGTCGACC TTCGGCACCA TGGAGGATTT CGACCGCCTG
CTCGCCGAAG TCCACCGCCG CGGCATGAGG CTGATCCTCG ACCTGGTGCT CAACCACACC
AGCGACGAGC ACCCCTGGTT CCTCGAGTCG CGCGCCTCGC CCGACAACCC CAAGCGCGAC
TGGTACATCT GGCGCGAGGG CCGCGACGGG CATCCGCCCA ACAACTGGGA GAGCATCTTC
CGCGGCCCCG CGTGGGCCCG GGACCCGGCC ACCGGGCAGT ACTACCTGCA CCTGTTCACC
CGCCGCCAGC CCGACCTCGA CTGGACCAAT CCGGAGATGC GCGCGGCCTT CCACGACATC
GTGCGCTGGT GGCTGGACAA GGGCATCGAC GGCTTCCGCC TCGATGCGGT GAGCCACATC
CGCAAGATGC CGGGCCTGCC CGACCTGCCC AATCCGCGCG GCCTGCCCTG GGTGCCGTCC
TTCGCCATGC ACATGAACGT CGACGGCGTG CTCGACACCA TCGGCGAGCT CTGCCGCGAG
ACCTTCCGCC GCTACGACGT GATGACCGTG GGCGAGGCCA ACGGCGTCGG CCCGCGCGAG
GCGGTGGAGT GGGTGGGCAG CGACCGCGGC CGGCTCGACA TGATCTTCCA GTTCGAGCAC
CTGGCGCTGT GGTCGCGCGC GCCCGGCGCG CCGCTCGACG TGGTCGCGCT CAAGAAGGTG
CTGTCGCGCT GGCAGCATGC GCTGCACGGC AAGGGCTGGA ACGCGCTCTT CCTGGAGAAC
CACGACATCC CCCGCGTCGT CTCCAAGTGG GGCGACACCG GCGCGCTGTG GCGCGAGAGC
GCGACCGCGC TGGCGACGAT GTACTTCCTG ATGGAGGGCA CGCCCTTCAT CTACCAGGGC
CAGGAGATCG GCATGACCAA CGGCGTCTTC GAGCGCATCG AGGACTTCGA CGACGTGCTG
GCGAAGAACG ACTACGCGCA GCGCCGCCTG GCCGGCGAGG AGGAGGGCGC GATCGTCGCC
GACCTCGTGC TCACCGGCCG CGACCCGGCG CGCACGCCGA TGCAGTGGGA CGACGGCCCT
CAGGCGGGCT TCACGCGCGG ACGGCCGTGG CTGGCGGTCA ATCCCAACCA TCGCCGCATC
AACGTCGCCC AGCAGCGCCA CGACCCGGCT TCGGTGCTCA ACCACTACCG CCGCCTGATC
GCGCTGCGCA AGGCCGAGCC GGCGCTGGTG CTCGGCGACT ATCGCCTGCT GATGAAGGAC
GACGCGCAGA TCTACGCCTA CCAGCGCCGG CTGGACGGCG AGCGCATTGC GGTGATCGTC
AACCTGAGCC CTCGCCCGGC GCGCTTCGAT CATCCCGGCG TGGTGCTCCG CCACGAACGC
CTGCTGCTCG CCAACCGCGC CGTCGAAGCG CACCCTGCCG CCCACGCGCT CGAGCTCGCA
CCCTACGAGG CCCGCGTATA CCGCGTGGGA AAAATGTAG
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| Protein sequence | MPPSAAPSVG PQPVSSPAAP WWKSAVAYQL YPRSFMDSDG DGIGDLRGIL ARLDYLQWLG
VDVIWICPIF DSPNDDNGYD IRDYRKILST FGTMEDFDRL LAEVHRRGMR LILDLVLNHT
SDEHPWFLES RASPDNPKRD WYIWREGRDG HPPNNWESIF RGPAWARDPA TGQYYLHLFT
RRQPDLDWTN PEMRAAFHDI VRWWLDKGID GFRLDAVSHI RKMPGLPDLP NPRGLPWVPS
FAMHMNVDGV LDTIGELCRE TFRRYDVMTV GEANGVGPRE AVEWVGSDRG RLDMIFQFEH
LALWSRAPGA PLDVVALKKV LSRWQHALHG KGWNALFLEN HDIPRVVSKW GDTGALWRES
ATALATMYFL MEGTPFIYQG QEIGMTNGVF ERIEDFDDVL AKNDYAQRRL AGEEEGAIVA
DLVLTGRDPA RTPMQWDDGP QAGFTRGRPW LAVNPNHRRI NVAQQRHDPA SVLNHYRRLI
ALRKAEPALV LGDYRLLMKD DAQIYAYQRR LDGERIAVIV NLSPRPARFD HPGVVLRHER
LLLANRAVEA HPAAHALELA PYEARVYRVG KM
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