| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2007 |
|---|
| Symbol | |
|---|
| ID | 7083762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2267665 |
|---|
| End bp | 2270364 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643699032 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_002355654 |
|---|
| Protein GI | 217970420 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA CCCCGTTCGA TACGCTCCGC CCCCTGCCCG CGTCCGCCGC CCGCCTCTCC
TATCACTCGC TGCCGGCGCT CGAAGAGGCC GGCGTGGGCC GCATCTCGCG GCTGCCGGTG
TCGATCCGCA TCGTGCTCGA GGCCGTGCTG CGCCACTGCG ACGGCCACAA GGTGACCGCC
GAGCACGTGC GCGAACTCGC CAACTGGGAG GCCGACGCGC CACGCACCGC CGAGATCCCC
TTCGTGGTCG CGCGCGTGGT GCTGCAGGAC TTCACCGGCG TGCCGCTGCT CGCCGACCTC
GCCGCGATGC GCAGCGTGGC CGTGGCGCAG GGCCGCGAGG CCAAGCTCAT CGAGCCGCTC
GTGCCGGTCG ATCTGGTGGT CGACCACTCG GTGCAGATCG ACCACTACGG CACGCCCGAC
GCGCTGCGCC GCAACATGGA GATCGAGTTC GAGCGCAACC ACGAGCGCTA CCAGTTCATG
AAGTGGGGCA TGCAGGCCTT CGACAGCTTC CGCGTGGTGC CGCCGGGCAT CGGCATCGTG
CACCAGGTCA ACCTCGAACA CCTTTTCCGC GGCGTGCGCA CGCGCGATGG CCTGTGCTTC
CCCGACACCC TGGTGGGCAC CGACTCGCAC ACCACCATGA TCAACGGCAT CGGCGTGGTG
GGCTGGGGCG TGGGCGGCAT CGAGGCCGAA GCGGCGATGC TCGGCCAGCC GGTGTACTTC
CTCACCCCCG ACGTGATCGG CGTGGAGCTG CGCGGCAGCC TGCCCGGCGG CACCACCGCC
ACCGACCTGG TCCTCGCCGT CACCGAGATG CTGCGGCGCG AGAAGGTGGT GGGCAAGTTC
GTCGAGTTCT TCGGCGAGGG CACCGCCAGC CTGTCGGTCA CCGATCGCGC CACCCTCGCC
AACATGGCGC CGGAGTATGG CGCCACCATG GGCTTCTTCC CGGTGGACGC GAAGACCATC
GACTACATGC GCGCCACCGG CCGCGAAGAG GCCGAATGCG CGCTGATGGA AGGCTACTTC
CGCGCGCAAG GCCTGTTCGG CGTGCCGCGC GCGGGCGAGA TCGACTACAC GCGCAGCCTG
ATGCTGGACC TCGCCACGAT CGAGCCCGCG CTCGCCGGCC CCAAGCGCCC GCAGGACCGC
ATCGCCCTGC CCGCCATGCG CCACGAGTTC GAGCGCCTGT TCTCCGCGCC AGTGTCCGAG
AACGGCTTCG GCCGCGAGGC CGCCCGGCTC GACGACCGCT TCGCCACCGG ACGAGAGGAT
GTGGACCTCG GCCACGGCGA CGTGCTGATC GCCGCCATCA CCTCGTGCAC CAACACCAGC
AACCCGGCGG TGATGATCGC CGCCGGCCTG CTCGCGCAGA AGGCGGCCGC GCGCGGGCTG
CGCGTGAAGC CACACATCAA GACCTCGCTC GCGCCGGGCT CGCGGGTGGT CACCGACTAC
CTCGGCAAGG CCGGCCTGCT CGAGCCGCTC GCCACGCTCG GCTTCGCGCT CGCCGGCTAC
GGTTGCACCA CCTGCATCGG CAACGCCGGC GATCTCGCCC CCGACTTCAA CGCGGCGATC
GTCGAGCACG ACCTCGTGGT GGCCGCCGTG CTGTCGGGCA ACCGCAATTT CGAGGCCCGC
ATCCACCCCA ACATCCGCGC CAACTACCTC GCCTCGCCGC CGCTGGTGGT GGCCTTCGCG
CTCTCCGGGC GGGTCAACAT CGACCTCGAC ACCGAGCCGC TCGGCACCGG CAGCGACGGT
CGGCCGGTGT ATCTGCGCGA GCTCTGGCCG AGCTCGGACG AGATCGCCGC CGCACTACCC
TTCGCCACCG ATCCGGCCAG CTACCGCCGG CTCTACGCCG ACTTCACGCG CGACCACGAC
CTGTGGAACG CGATCCCCGC GCCCACCGGC CAGACCTACG ACTGGCCGCC CTCCACCTAC
ATCGCCTGCC CGCCCTTCTT CGCGGGCTTC GGCATGACGC CCCCGCCGGC GAGCGACATT
CACGACGCAC GCGCACTGCT GCTGCTCGGC GACTCGGTGA CCACCGACCA CATCTCGCCC
GCAGGTTCCT TCCGCGAGAC CAGCCCGGCC GGGCGCTGGC TGCGTGGGCA GGGTGTGGAG
AAGACGGACT TCAACTCCTA CGGCTCGCGT CGCGGCAACC ACGACGTGAT GGTGCGCGGC
ACCTTCGCCA ACGTGCGCGT GAAGAACCTG ATGCTGCCGC CCAACCCCGA CGGCAGCCGC
GTCGAAGGCG GCTACACCCT GCTCGACGGC GAGCAGACCA CGGTGTTCGA GGCGGCGAGC
GCATGGATCG CGCGCGGCGT GCCGACCATC GTGTTCGCGG GCGAGGAATA CGGCACCGGC
TCGTCGCGCG ACTGGGCTGC CAAGGGCACC GCGCTGCTCG GGGTGAAGGC GGTGGTGGCG
AGGAGCTTCG AGCGCATCCA CCGCTCCAAC CTGGTCGGCA TGGGCGTGCT GCCGCTGCAG
TTCATCGGCG AGGACAGCTG GCAGGCGCTG GGGCTGGATG GGAGCGAGAA GTTCACGCTG
GAAGGCATTG CCGCCGGTCT GGCGCCGCAG CGGACGCTCA CGCTGCAGAT CGAGCGCGCC
GACGGCTCGA GGCAGTCCGT GCCCCTGCTG TGCCGTATCG ACACCCCGAT CGAGGTCGAG
TACTACCGCC ACGGCGGCAT CCTGCCCTAC GTGCTGCGCG CGATCCTCGG CGGAAGCTGA
|
|---|
| Protein sequence | MSATPFDTLR PLPASAARLS YHSLPALEEA GVGRISRLPV SIRIVLEAVL RHCDGHKVTA
EHVRELANWE ADAPRTAEIP FVVARVVLQD FTGVPLLADL AAMRSVAVAQ GREAKLIEPL
VPVDLVVDHS VQIDHYGTPD ALRRNMEIEF ERNHERYQFM KWGMQAFDSF RVVPPGIGIV
HQVNLEHLFR GVRTRDGLCF PDTLVGTDSH TTMINGIGVV GWGVGGIEAE AAMLGQPVYF
LTPDVIGVEL RGSLPGGTTA TDLVLAVTEM LRREKVVGKF VEFFGEGTAS LSVTDRATLA
NMAPEYGATM GFFPVDAKTI DYMRATGREE AECALMEGYF RAQGLFGVPR AGEIDYTRSL
MLDLATIEPA LAGPKRPQDR IALPAMRHEF ERLFSAPVSE NGFGREAARL DDRFATGRED
VDLGHGDVLI AAITSCTNTS NPAVMIAAGL LAQKAAARGL RVKPHIKTSL APGSRVVTDY
LGKAGLLEPL ATLGFALAGY GCTTCIGNAG DLAPDFNAAI VEHDLVVAAV LSGNRNFEAR
IHPNIRANYL ASPPLVVAFA LSGRVNIDLD TEPLGTGSDG RPVYLRELWP SSDEIAAALP
FATDPASYRR LYADFTRDHD LWNAIPAPTG QTYDWPPSTY IACPPFFAGF GMTPPPASDI
HDARALLLLG DSVTTDHISP AGSFRETSPA GRWLRGQGVE KTDFNSYGSR RGNHDVMVRG
TFANVRVKNL MLPPNPDGSR VEGGYTLLDG EQTTVFEAAS AWIARGVPTI VFAGEEYGTG
SSRDWAAKGT ALLGVKAVVA RSFERIHRSN LVGMGVLPLQ FIGEDSWQAL GLDGSEKFTL
EGIAAGLAPQ RTLTLQIERA DGSRQSVPLL CRIDTPIEVE YYRHGGILPY VLRAILGGS
|
|---|
| |