| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1848 |
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| Symbol | |
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| ID | 7084271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2075502 |
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| End bp | 2079467 |
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| Gene Length | 3966 bp |
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| Protein Length | 1321 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643698871 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_002355496 |
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| Protein GI | 217970262 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACC GCCTCGACCC CGCCTGCTTT CCGCTGCGCG GCAGCCGCCT CATCGAGGCC
AGCGCCGGAA CCGGCAAGAC CTGGACCATC GCCGCGCTCT ACCTGCGCCT GGTGCTCGGC
CACGGCGACG CCGACACCGC CTTCGCGCGT CCGCTGCTGC CCGCCGAGAT CCTGGTGATG
ACCTTCACCC GCGCCGCCAC GCGCGAGCTC TCCGAGCGCA TCCGCGAGCG CCTGCGCGAG
GCTGCGGCCT GGTTCCGCAA CGAAGATGCG GGCCGCGCAC CCGACCCCCT GCTCGACGAA
CTGCGCGCTG CCTACCCCGA CGCGGCCGCG CGCCGCAACG CCGCCTGGCG CCTGGCGATG
GCGGCCGCGG CCATGGACGA CGCGGCGGTG TTCACCATCG ACGCCTGGTG CCAACGCATG
CTGCGCGAAC ACGCCTTCGA CAGCGGCAAC CCCTTCGACG AGGAGCTCGC CGCCGACGAG
AGCGTGCTGC TGACCGAGGC CGCGCAGGAC TACTGGCGCC AGCACTGCTA CCCGCTCGCC
GGCGAGGCGC TGGAGCTCGT ACTCGCGCAG TGGGCCGACG TGCACGCCCT CGTCGAGGAC
ATGCGCGCGC TCGTCGGCCA ACCGCTGCAG GGCGCGGATC GGGATGACGG CGGGGACCGG
GATCGGAGCG CGGATCCCGG CGACCAGGAC GGCGTGCGGC GCGATTCGGC CGGTGGCGAA
ACCCTGGCCG CGCTGATCGG GCGCGTCGGC GGCGCGCACC GCCGGGCGCG GGTGGCGCTC
TCGCGTGGCT GGGCCGAGCG CGCGCGCGCC ATGAAGGACT GGCTGGACGA GGAACTCGCC
ACCAAGGCCA AGCTGTGGAA TCGCACCAAG CTGCACGAGC GCTATTACAC GCCCTGGCTG
GAGGCGCTCG AACAGTGGGC GCGCAACCCG CTCGACCGCA GGCTCGAGCT CCCCGACAGC
GCCCGCCACC GCCTCACCCC AGACGGCCTG CTCGAGGCGC GCAAGGCCGA CGCCCCGGCG
CCCGTGCTGC CCGAGCACTT CGCCGCCTTC GCCGGCCTGA TCGAAGACCA CGACGCCCTA
CCCGACCCGC GCACCGCGCT ACGCATCCAC GCCGCCACCC GGGTCGGCGA GCGCCTCGCC
GAGCTCAAGC GCCAGGCGCG CAGCTTCGGC TTCGCCGACC TGCTCGACCG TCTCGACCGC
GCCCTCGCCG GGCCGCACGG CGCGCGCCTG CGCGAGCGCA TCCTCACCCA GTACCCGGTG
GCGCTGATCG ACGAGTTCCA GGACACCTCG CCTCTGCAGT ACCGCCTCTT CGACGCGCTC
TACCGCGCCG CCGACGACGA CCCGCGCAGC GCGCTGCTGC TGATCGGCGA CCCCAAGCAG
TCGATCTACG GATTTCGCGG CGCGGACATC TACAGCTACC TGCAGGCCCG CCGCGCCACC
GCCGGCCGGC ACTACATGCT CGGCACCAAC TTCCGCTCGG CGCACGCGCT GGTGGGCGCG
GTCAACGCCT GGTTCGCCCA GGCCGAGGAC CGCCCGGGCG CGGGCGCCTT CGGCTTTCGC
GACGGGGCGG ACAACGCCCT GCCCTTCGAG GCGGTGGCGG CGCAGGGGCG CGAAGAGGTC
TTCCATGCCG ATGGCGGCGT GCCCCCGGCG CTGCTCATCC ACCATGACCT GACGCTGCGC
AGCGCCGGCG AGATCCGCCG CCTGTTCGCC GCGCGCTGCG CCGAGCGCAT CGTCGGCTGG
CTCAACGACG AGCACGCCGG CTTCCAGGCC CCCGGCAAGG CATTCCAGCG CCTGCGCCCG
GCCGACATCG CGGTGCTCGT GCGCAGCGGG CGCGAGGCCG CGGAGGTGCG GCGCGCGCTG
CGCCGGCGCG GCCTGGCCTC GGTCTATCTG TCGGACAAGG ACTCGGTCTT CGCCAGCGCG
GAGGCGCACG ACCTGCTGCA CTGGCTGCGC GCGGTGGCCT CGCCGCTCGA CGCCCGCCTC
GTGCGCGCCG CGCTCGCCAC CCGCACGGTG GGCCTGTCGA TCCCCGAACT GGCCCGGCTG
GCGAGCTCGG ACGCCGCCTT CGACGCGCGC AGCGAGCAGT TCCGCGCGCT GCACGTCGCC
TGGCGCGAGC TCGGCGTGCT CACCATGCTG CGCCGCAGCC TGCACCTGCT CGACCTGCCC
GCGCGCTGGC TGGCCGAGCC CGAGGGCGAG CGCCGGCTCA CCAACTTCCT GCACCTGGCC
GAGCTGCTGC AGCAGGCCGG CGCCACGCTC GAGGGCGAGA CCGCGCTGGT GCGCTGGCTG
GCGATGACGA TCGAGGCCGG CGGCAGCCGC GCCGGCGAGG AACAGGTGGT ACGCCTGGAG
AGCGACGCCG ACCTCGTCAA GGTGGTCACG GTGCATAAGA GCAAGGGTCT CGAATACCCC
GTGGTCTGCC TCCCCTTCGC CACCAGCTTC CGCGCGGTGG AGCGCAGGAC CGCGCGCTAC
CTCAAGCTCG CCGACGCCAG CGGGCGGCGG CGGCTCGCGC TCGACTACGA CGACGCCGAC
CTCGAACGCG CCGAGGCCGA GCGCCTGCGC GAGGACCTGC GCCTGTTCTA CGTCGCGCTG
ACGCGCGCGC GCCACGCGCT GTGGATGGGC TTCGCCGCGG TCAGGATCGG CAAGGGCAAG
GCCTGCCAGA CCCATCGCAG CGCGCCCGGG CACCTGCTCG CGGGCGGCGC TGCGCTCGAC
GAGGCCGCCT GGCTCGCCCC GCTGCAGGCG CTGGCGACAG CCGCCGCGCA GGATGGCGCG
ACCGGCACGG AGGCCGACGG CCGCACCCGC ATCGCGCTCG AGGCCGCGCC GCCCGAAGAG
GCGCACACCC TGCTGCGCCG GCGCGAGGCC TTGCCGCCGC TGCAGGACAG CGCGCCCTAC
CGCGCCGACT TCGAGCGTCG CTGGTCGCTC GGCAGCTTCT CCGCGCTGGT GCGCGACATC
GATCCGGCGC AGATGGTCGC CCTGCCGGGC GCCGGAAGCG CGCCACCGGC GCCCGCACGC
GGCACCACCG CCGACCTCTT CGCCGCGGCG CCCGATGAAG CCGGCTCGGC AGCCCCCCTG
GCGGCGGACG ATTACGGCCA GGCCGAGGCG GCCGGGGCCG CCCGCATCCT GCCGGTCCAC
GTCCGCCGCC CGGCGGCCGA CGAGGCGCTC GTCCGCCTGG AGGAGGATGC CGCACTGGCG
CCATCCGGTG CGGACGGTGG CCTCGCCCTC GCCCCCCCCG ACACGGACCG GCCGCCTTGG
CACCGCTTCC CGCGCGGCGC CTTCGCCGGC GACTTCCTCC ACGACGTGCT CGAATGGCTC
GCCGCGGAAG GCTTCGCGCT CGGCGCCAAC GAGGGCCTGG AGGCCGCGCT GCGCCGGCGC
TGCGAGCGCG CCGGCCACGG CGAGCGTACC GACGAGCTTG TGCAGTGGAT GCGCGCCCTG
CTCGGCGCCC GCCTGCCCAG CCTGGACGCG GCGCTGCAGG ACCTGCGCGT GCTGATCACC
GAGATGGAGT TCTGGCTGCC CTCCGCTCAC CTGCAGGCGA CGGCGGTGGA CGCGCTGTGT
CGGCGCCACC TGCTCCACGC CCAGCCCCGC CCCGCACTGC CGCAGCGCGA ACTGCACGGC
ATGCTGATGG GCTTCGCCGA CCTGGTGTTC GAACACGACG GGCGCTATTG GGTGCTGGAC
TACAAGTCGA ACAGCCTGGG CGAGGACGGC AGCGCCTACG ACCGCGCCGC ACTCGAGGCG
GCGATGGCGC ATCACCGCTA CGACGTGCAG GCGGCGATCT ACCTGCTCGC GCTGCATCGC
CTGCTGCGCG CGCGCCTGGG CGGGGCCTAC GAGCCCGCCC GCCAGCTCGG CGGCGCGCTG
TATCTCTTCC TGCGTGGCAT CGACGGGCCG GCGCGCGGCG AATACGCCAT CCCGGCCACG
CCGGCGCTGA TCGAGCTGCT CGACACCCTG GACCACCTGC TCGCCGACGA GGCTTCCCTG
GCATGA
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| Protein sequence | MSHRLDPACF PLRGSRLIEA SAGTGKTWTI AALYLRLVLG HGDADTAFAR PLLPAEILVM
TFTRAATREL SERIRERLRE AAAWFRNEDA GRAPDPLLDE LRAAYPDAAA RRNAAWRLAM
AAAAMDDAAV FTIDAWCQRM LREHAFDSGN PFDEELAADE SVLLTEAAQD YWRQHCYPLA
GEALELVLAQ WADVHALVED MRALVGQPLQ GADRDDGGDR DRSADPGDQD GVRRDSAGGE
TLAALIGRVG GAHRRARVAL SRGWAERARA MKDWLDEELA TKAKLWNRTK LHERYYTPWL
EALEQWARNP LDRRLELPDS ARHRLTPDGL LEARKADAPA PVLPEHFAAF AGLIEDHDAL
PDPRTALRIH AATRVGERLA ELKRQARSFG FADLLDRLDR ALAGPHGARL RERILTQYPV
ALIDEFQDTS PLQYRLFDAL YRAADDDPRS ALLLIGDPKQ SIYGFRGADI YSYLQARRAT
AGRHYMLGTN FRSAHALVGA VNAWFAQAED RPGAGAFGFR DGADNALPFE AVAAQGREEV
FHADGGVPPA LLIHHDLTLR SAGEIRRLFA ARCAERIVGW LNDEHAGFQA PGKAFQRLRP
ADIAVLVRSG REAAEVRRAL RRRGLASVYL SDKDSVFASA EAHDLLHWLR AVASPLDARL
VRAALATRTV GLSIPELARL ASSDAAFDAR SEQFRALHVA WRELGVLTML RRSLHLLDLP
ARWLAEPEGE RRLTNFLHLA ELLQQAGATL EGETALVRWL AMTIEAGGSR AGEEQVVRLE
SDADLVKVVT VHKSKGLEYP VVCLPFATSF RAVERRTARY LKLADASGRR RLALDYDDAD
LERAEAERLR EDLRLFYVAL TRARHALWMG FAAVRIGKGK ACQTHRSAPG HLLAGGAALD
EAAWLAPLQA LATAAAQDGA TGTEADGRTR IALEAAPPEE AHTLLRRREA LPPLQDSAPY
RADFERRWSL GSFSALVRDI DPAQMVALPG AGSAPPAPAR GTTADLFAAA PDEAGSAAPL
AADDYGQAEA AGAARILPVH VRRPAADEAL VRLEEDAALA PSGADGGLAL APPDTDRPPW
HRFPRGAFAG DFLHDVLEWL AAEGFALGAN EGLEAALRRR CERAGHGERT DELVQWMRAL
LGARLPSLDA ALQDLRVLIT EMEFWLPSAH LQATAVDALC RRHLLHAQPR PALPQRELHG
MLMGFADLVF EHDGRYWVLD YKSNSLGEDG SAYDRAALEA AMAHHRYDVQ AAIYLLALHR
LLRARLGGAY EPARQLGGAL YLFLRGIDGP ARGEYAIPAT PALIELLDTL DHLLADEASL
A
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