Gene Tmz1t_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1728 
Symbol 
ID7085694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1946395 
End bp1946802 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID643698747 
ProductSmpA/OmlA domain protein 
Protein accessionYP_002355377 
Protein GI217970143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCCC TCCTCGCTGC GCTCATCGTC TCTTCCGGCC TGCTTGCAGG CTGCTCCTTC 
GACTCCGTTG TCGGCCTGGT CGACCCCTAC CGGATCGACA TCCGCCAAGG CAATTACGTC
GACCAGGAGA TGGTCGCGCA GCTTCGCCGC GGCATGACCC GCGACCAGGT GCGCTACGTG
CTCGGCTCCC CCCTGGTGGT CGACATGTTC CGCAAGGACC GCTGGGACTA CGTCTATCGC
TTCCGCCCGG GCAGTGGCGA GGCGCAGCAG CGCGTGATCT CGCTGTTCTT CACGGGCGAC
GTGCTCGACC GCATCGAGGG CGACGTCGCT GCCGCCTCGG GTACGCCCGC CGCGGCGGCG
CAGGAGCGCT CGCGCGTGGT CGAGATCCCC CCCGCCAGCG CGCGCTGA
 
Protein sequence
MRSLLAALIV SSGLLAGCSF DSVVGLVDPY RIDIRQGNYV DQEMVAQLRR GMTRDQVRYV 
LGSPLVVDMF RKDRWDYVYR FRPGSGEAQQ RVISLFFTGD VLDRIEGDVA AASGTPAAAA
QERSRVVEIP PASAR