| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1709 |
|---|
| Symbol | |
|---|
| ID | 7084129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1922696 |
|---|
| End bp | 1923175 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643698730 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002355360 |
|---|
| Protein GI | 217970126 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCCG AAACCTCCCC AAGCTACCCG CTGGCCGAAC TGGCCGTGCT CGCGGACCTG
CCGCCGCGCA CGGTGCGCTA CTACGTGCAG ATCGGCCTGG TCGACCGACC CGAGGGCGAG
ACCCGGGCGG CCCGCTACGG CACGCGGCAT CTCGAGCAGC TGCTGCAGAT CCGCAAATGG
ACCGCTGCCG GCGTCTCGCT CGAGCGTATC CGCGAGCTGC TCCACGGTGC GCCGCCGCCG
GTGCCGCCGC GTGAGCGCGC CATCGGCAGC GTGTCGGTGT GCAGCCATCT GACGGTGGCC
GAGGGGGTCG AGGTGGTGAT CGATGCCCAG CGCGCGGGCC TGAGTCCCGA GGCGGTGCGC
CAGTTCATCC AGGGCGTGAT GGCCGCCTTC GAGGCGGTGC AGGGGCAAGG CGGGGCAGCG
TCGCAGGGCG CTGCCGCGCA CAACACGGAC AAGAACGACC GACAGGCGGG AGAACCATGA
|
|---|
| Protein sequence | MNSETSPSYP LAELAVLADL PPRTVRYYVQ IGLVDRPEGE TRAARYGTRH LEQLLQIRKW
TAAGVSLERI RELLHGAPPP VPPRERAIGS VSVCSHLTVA EGVEVVIDAQ RAGLSPEAVR
QFIQGVMAAF EAVQGQGGAA SQGAAAHNTD KNDRQAGEP
|
|---|
| |