| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1645 |
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| Symbol | |
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| ID | 7084064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1844167 |
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| End bp | 1845969 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643698665 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002355296 |
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| Protein GI | 217970062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCTT CCGGACACCT GCCGGGCCTG CCGCCCTCCC CCGGCCCCTC CTCTGCCGAG
CCCTTCGTCG CGGACCTTTC GGAGGGCGCC GAGACCGGCG TATACCTCGC CCTGCTCGAG
CTGCTCGACG AGGGCCTGCT GATCACCGGC GACGAGGTCG TGCTCGACGC CAACAGCGCC
GCCTGCCGCC TGCTCGGCCG CGACTACCGC GACGTGGCAG GGCGTCCGCT CGCCGACCTC
TTCGCCGACG GCCAGGCCTT CCTGGCCGCG CGCGCGCGCC TGCTGATCGA GGGCGAACGC
CGCGGCCGCC TCGACTTCGC TCTCCCGGAT GGCGGCGTGC GCGCGCTCGA GTTCAACTGC
GCGCCGCGGC TGCGCCCCGG CATCCACGCC ATCATCCTGA GCGCGCCCGC AGTCGTGGCG
GAGTACGAAA CGGGCACCCC CGTCCTCGCA GCGCCACGCC CGACAGCAGG CGGTGCGCGC
GCGTTCGACG ACGCGCCGTC GATGTCGATG TACCTGACGA GCCACGACCC GCTCACCGGC
CTGGCCAACC GCCGCATGCT CGAGGCGCGC TTCGGTGACT GCGCGGTGCG CGCGGCGGGC
CGCCACGGCA GCATCGCGAT CGTGCGCCTC GACCTCGACG GCTTCGCCGC GGTCAATCGC
AGCCTGGGCG AGAGCGCCGG CGACGAGGTC CTCCGGTGCA TCGCCCGCCG CCTCGCCGCT
ACCGCCGGTT CCGCTGCCCT GGTGGCGCGC GAGCGCAGCG ACAGCTTCAT CGTGCTGCTG
CCCGAGCCGG CGCATCCCGG CAACGCCGAC CAGTTCGCCG AAACCCTGCT GCGCGCAGTG
GCCGAGCCCC TCGAGCTCGG CGGCGGGCTG CAGCGCATCA CCGCCAGCGC CGGCCTCGCC
CTCTATCCGC AGGACGGGCG CAACCTCGAC ACCCTGCTGC GCAACGCCAA GAGCGCGCTC
GAACAGGCAC GCCGGCTCGG CGGCAACCAC TGCAGCGTCT TCCACACCCG GCTCGACGGC
CCCGGCTTCG ACAGCAGCCA TCTCGAACGC GGCCTGCGCC ACGCCTTGCA AGCCGACGAG
CTGTGCCTGC ACTTCCAGCC GCTGGTCGAT GCGCGCTCCG GTCGCACCCG TGCGGGCGAG
GCCTTGCTGC GCTGGCGCCA CCCCGAGCTC GGCCTGCTGC CCTACCGCCA GTTCATGGGT
GCGGTCGGCG ACCCCCGCCT GCTCGCCGAC GTCGGCGACT GGGTGCTGGC CACTGCCTGC
GACCACGCCA CCGACTGGCC GCCGACGCAC GATGGCGAAT GCCTGCGCCT GACGGTGAAT
GTCTCGGTCG AGCAGCTCAT GCGCGGCGAC TTCGCGGCGC GCGTCGCGAC CGCCCTGCGC
ACCTCCGGGC TGAAGGCGGA GCGGCTCGAG CTCGACCTCG ACGAAAAGGT GCTGGCACTC
GACAGCCCGA CGCTCGCCGC CACACTGGAG CGCATCGCCG CCACCGGCGT GCGCCTGTCG
ATCGACGACT TCGGCCGCGG CCTGTCGTCC ATCCCGCGCC TGCGCCGCTA CCCGCTCGCC
GCGCTCAAGC TCGACCCCGA GCTGGTACGC GGGGTCGGTC GCAGCGAGGA CAGCGAGGCC
ATCGTCGAGG CGGTCGGCGC GCTCGCCGGC ACGCTCGGGC TGGAAATCTA CGCGCGTGGG
GTCGAGCACC GCGGCCAGCA GGCCTTCCTG TGCGCGCTCG ACTGCCACCT GCAGCAAGGG
CCGCTGTTCG GGCGGCCGCT GGCGGCGCGG GAGTTCGCGG ACCGCCTGCT CCGCGCTCAG
TAA
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| Protein sequence | MNPSGHLPGL PPSPGPSSAE PFVADLSEGA ETGVYLALLE LLDEGLLITG DEVVLDANSA
ACRLLGRDYR DVAGRPLADL FADGQAFLAA RARLLIEGER RGRLDFALPD GGVRALEFNC
APRLRPGIHA IILSAPAVVA EYETGTPVLA APRPTAGGAR AFDDAPSMSM YLTSHDPLTG
LANRRMLEAR FGDCAVRAAG RHGSIAIVRL DLDGFAAVNR SLGESAGDEV LRCIARRLAA
TAGSAALVAR ERSDSFIVLL PEPAHPGNAD QFAETLLRAV AEPLELGGGL QRITASAGLA
LYPQDGRNLD TLLRNAKSAL EQARRLGGNH CSVFHTRLDG PGFDSSHLER GLRHALQADE
LCLHFQPLVD ARSGRTRAGE ALLRWRHPEL GLLPYRQFMG AVGDPRLLAD VGDWVLATAC
DHATDWPPTH DGECLRLTVN VSVEQLMRGD FAARVATALR TSGLKAERLE LDLDEKVLAL
DSPTLAATLE RIAATGVRLS IDDFGRGLSS IPRLRRYPLA ALKLDPELVR GVGRSEDSEA
IVEAVGALAG TLGLEIYARG VEHRGQQAFL CALDCHLQQG PLFGRPLAAR EFADRLLRAQ
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