Gene Tmz1t_1370 details

Gene Information

• Locus tag: Tmz1t_1370
• Symbol: greB
• ID: 7084491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 1524532
• End bp: 1525086
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643698387
• Product: transcription elongation factor GreB
• Protein accession: YP_002355025
• Protein GI: 217969791
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0620195
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACAAGG CATTCGTGAA GGAAGATCCG GGCAACGACG AGGACGAGGA GCTGGCTCCT 
GGTCTGCGCC TGCCACCCGG CAGCAAGAAC TACATGACCC GGCGCGGCTA CGATGCGCTG 
CGCGTCGAGC TCGACCAGCT CGTGCGCGTC GAGCGCCCGA AGCTGGTCGA GACCGTGGCC 
TGGGCCGCGG GCAACGGCGA TCGCTCGGAG AACGGCGACT ACATCTACGG CAAGAAGCGC 
CTGCGCGAGA TCGACCGCCG CATCCGCTTC CTGATCAAGC GCATCGAGAG CGCCGAGGTG 
GTCGATCCCG AGCGCCAGCA GGGCCTGGAG CAGGTCTTCT TCGGTGCGAC GGTGAGCTTC 
AGCGATCTCG ACACCGCGGA GGAGCAGACC CTGCAGATCG TCGGGGTCGA CGAGGCCGAC 
GCCTCGCAGG GGCGCATCAG CTGGATCTCG CCCCTGGCGC GTGCGGTGCT CAAGGCGCGC 
GTCGGCGACG TGGTGCGCTT CCACAGCCCG GCCGGCGTGC GCGAGATCGA GATCGGCGCG 
GTGGAATACC GCTGA 

 

Protein sequence

MNKAFVKEDP GNDEDEELAP GLRLPPGSKN YMTRRGYDAL RVELDQLVRV ERPKLVETVA 
WAAGNGDRSE NGDYIYGKKR LREIDRRIRF LIKRIESAEV VDPERQQGLE QVFFGATVSF 
SDLDTAEEQT LQIVGVDEAD ASQGRISWIS PLARAVLKAR VGDVVRFHSP AGVREIEIGA 
VEYR