| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1310 |
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| Symbol | |
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| ID | 7085475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1442966 |
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| End bp | 1445104 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643698327 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002354965 |
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| Protein GI | 217969731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGA CCGTCAACCT GCTGATCGTC GAGGACAACG AATCCGATGC CGCTCTGGTC
GTGCGCCAGC TCGAGCGCGC CGGCTACACG GTGGCGACGG CGCGCCGCGT CGATCGCGCC
GCGGAACTCG GCGCCGCGCT CGAGGCCTGC GCGTGGTCCG CGGTGCTGTG CGACTACGCC
CTGCCCGGGT TCAGCCCCGA GGAGGCCCTC GCCCAGGTGC AGGCGAGCGG CCTCGACCTG
CCCTTCGTGG TCGTCTCGGC CTCGCTCGCC GACGAGGAGG CCGGCCGCCT GATGGCGCTC
GGCGCACACG ACTACGTGCA CAAGCACGAT CTCGCGCGCC TCGCCCCGGC GCTGGCGCGC
GGCCTGGCCG AGGCGCGCGG GCGCCGGGCC CGCCGCCACG CCGAGGACGG CCTGCGTGCC
CGCGAGGCCC ACCTGCGCAT CTGGGGCGAG GTCGTCGAGG GCCTGCACGA AGGCATCGTG
GTGACCAACC TCGCCGGCGA CATCCTCGAC TGCAACCCGG CCTTCGAGCG CATCACCGGC
CATGCGCGCG CCGAGGTGCT CGGGCTCAAT CCGCGCGTGC TCAAATCCGG CCGCCACGAC
GCCGCCTTCT ACGCCGGCAT GTGGGACGCG CTGGTCACGC GCGGCTCGTG GGTCGGCGAG
GTGTGGAACC GGCGCAAGAG CGGCGAGATC TACCCCGAGC GCCTGGCATT GCGTGCGGTG
CGCGGCGCCG ACGGCCTGCC CACGCACTAC GTGGGCATGT TCAGCGACAT CAGCCGCGAG
AAGCAGGACC AGGCCCGGCT CGACTACCTG ACCCACCACG ATCCCCTCAC CGGCTTCGCC
AACCGCCAGC TCTTCATGGA GCGGCTGCAG CAGGCGGTGG AGCGCGCCGC CGCCGGCGAG
GGCAAGGCCG CGGTGCTGCT GCTCGACCTC GACCGCTTCC GGCGGGTGAA CGAGAGCCTC
GGTCAGGACG CCGGCGACCG CCTGCTGCAA GTGATGGCCG AGCGCATCGC CGGCTGCCTG
AAGCGGCGCA GCAGCCTCGC CCGCCTGGGC AGTGACGAGT TCCTCGTGCT GATCACCGAG
TTCACCGATG CCGACGCGCT GGCCGCGCTC GCGCGACGCA TCCTCGACGA GATCGCCCGC
CCGGTGACGG TCAACGGCCA GCTCCTGCAC ATGAGCGCGA GCCTGGGCAT CAGCGTCCAT
CCTCAGGACG GCGCCGACGC CGAGCACCTG CTGCAGGCGG CCGAGGCCGC GCGTGCGCAG
ATCCGCCACG GCCTGGGCAA CCGCCTGCAC TTCTTCACCG CCGGCATGGA CACCCGGGCA
CGGCGCTGGA TCGAGGTCGA GAGCGAGCTG CGCCATGCGC TCGCGCGCGG CGAGCTGCAG
CTCTACTACC AGCCGATCGT GTGCGTGCGC GATGGCCGCG TACGCACCGT GGAGGCGCTG
CTGCGCTGGA ACAGCCCCGC GCTGGGCTGG GTGTCGCCGG CGGAGTTCAT CCCGGTGGCC
GAGGAGAGCG AGCTGATCGT CGCGATCGGC GACTGGGCGC TCGAGACCGC CTGCCGCCAG
GTCCGCCATT GGCAGGACAC CGGCCTGCCG GCGGTGCGCG TGGCGGTGAA CGTCTCCGCG
CACCAGCTCG CGGGCGGGCG CCTGCCCGAG CGCGTGCGCG AGGTGCTCGA GCGCACCGGC
ATCGACCCCG GCCAGCTCGA GCTCGAGCTC ACCGAGAGCG CGATGATGAG CGACAGCGAG
CACGGCGCGC GCCAGGTCGA GGCGATCAGC CGCATGGGGG TGAGCGTCGC GCTCGACGAC
TTCGGCACCG GCTACTCCTC GCTCGCCTAC CTGAGCCGCT TCGCTCTCAC CAAGCTGAAG
ATCGACCGCA GCTTCGTCGA TGGCCTGAGC CGCGACCCGA AGAGCTCGAT CATCGTGGAT
GCAACCCTGG GCCTGGCGCG CGGCCTGGGC CTGCGCGTGG TCGCCGAAGG CGTGGAAACG
GAGGAGCAGC GCGCGCTGCT CGCCGCCGCC GGCTGCGACG CGCTGCAAGG CTATCTGTTC
AGCCCGCCGG TGGCGCCCGC AGCCCTCGGC GCGCTGATCG ACCGCTTCGC GCCCGCCGAG
CGCTACGCAA AGCCGCGCGT GGTCGCGATC GGCGCCTGA
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| Protein sequence | MGETVNLLIV EDNESDAALV VRQLERAGYT VATARRVDRA AELGAALEAC AWSAVLCDYA
LPGFSPEEAL AQVQASGLDL PFVVVSASLA DEEAGRLMAL GAHDYVHKHD LARLAPALAR
GLAEARGRRA RRHAEDGLRA REAHLRIWGE VVEGLHEGIV VTNLAGDILD CNPAFERITG
HARAEVLGLN PRVLKSGRHD AAFYAGMWDA LVTRGSWVGE VWNRRKSGEI YPERLALRAV
RGADGLPTHY VGMFSDISRE KQDQARLDYL THHDPLTGFA NRQLFMERLQ QAVERAAAGE
GKAAVLLLDL DRFRRVNESL GQDAGDRLLQ VMAERIAGCL KRRSSLARLG SDEFLVLITE
FTDADALAAL ARRILDEIAR PVTVNGQLLH MSASLGISVH PQDGADAEHL LQAAEAARAQ
IRHGLGNRLH FFTAGMDTRA RRWIEVESEL RHALARGELQ LYYQPIVCVR DGRVRTVEAL
LRWNSPALGW VSPAEFIPVA EESELIVAIG DWALETACRQ VRHWQDTGLP AVRVAVNVSA
HQLAGGRLPE RVREVLERTG IDPGQLELEL TESAMMSDSE HGARQVEAIS RMGVSVALDD
FGTGYSSLAY LSRFALTKLK IDRSFVDGLS RDPKSSIIVD ATLGLARGLG LRVVAEGVET
EEQRALLAAA GCDALQGYLF SPPVAPAALG ALIDRFAPAE RYAKPRVVAI GA
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