| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0990 |
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| Symbol | |
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| ID | 7085093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1090773 |
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| End bp | 1092788 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698012 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002354652 |
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| Protein GI | 217969418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.585612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGT TCCTGTGCGA GAAGCCCTCC CAGGGCAAGG ACATCGCCCG TGTGCTGGGT
GCCGTTCAAC GCGGCAACGG CTGCTACAGC GGCGCGGGTG TCGTCGTGAC CTGGTGCATC
GGTCATCTGG TGGAGGCGGT TCCGCCCGAA GGCTACGGCG AGCAATACAA GCGCTGGGCC
ATCGAGCAAC TGCCCATTCT TCCTGAGCGT TGGCGTGTCG AGCCCAAGGC GGCGACCGCA
GCGCAATTCA AGGTCGTGCA GCAGCTCGTC GCCAAGGCGG GCGAGCTGGT GATAGCGACC
GACGCCGACC GCGAGGGCGA GATGATCGCC CGCGAGATCA TCGACCTGTG CGGCTACCGC
GGGCCGATTC AGCGCCTGTG GCTGTCGGCG CTCAACGATG CGTCGATCCG CAAGGCACTG
GGTGCGCTCA AGCCGTCCGC CGAGACGCTG CCGCTGTATT TCTCCGCACT CGCCCGATCG
CGCGCCGACT GGCTGATCGG GATGAACTTG AGCCGCTTGT TCACACTGCT GGGGCGTCAG
GCCGGCTATA CGGGCGTGCT GTCGGTGGGG CGCGTGCAGA CGCCGACGCT GAAGTTGGTC
GTGGATCGTG ATCGCGAGAT CGCGCGATTC GTCTCCATGC CGTATTGGGC CGTGGATGTG
CTGCTATCCC ATGCCGGCCA ATCCTTCACC GCGAGCTGGA TACCGCCCGA AGGCAGCACG
GATGCAGCGG GTCGCTGCCT TCAGCAGCCG GTGGCGCAGC AGGCTGCGGA TCGCATTCGC
GCGGCACGCG ATGCGCAGGT CGTGTCGGTG GACACCGAGC GCGTGCGCGA GGCACCGCCG
CTGCCGTTCG ACCTGGGCAC GCTGCAGGAG GTGTGCTCCA AGCAGTTGGG CCTCGACGTG
CAGGAGACGC TGGACATTGC CCAGGCGCTG TACGAGACGC ACAAGGCGAC AACGTATCCG
CGCTCGGATT CGGGCTACCT GCCCGAGAGC ATGCTGGCCG AGGTGCCGAC CGTACTCGAC
AGTCTGGTCA AGACCGACCC CAGCCTGCGG CCGCTGATCG AGCGCCTGGA TCGCCAACAG
CGCTCGCGTG CATGGAACGA CGGCAAGGTG TCGGCTCACC ACGGCATCAT CCCGACGCTG
GAGCCCGCCA ACCTGTCGGC CATGAACGAG AAGGAACTGG CCGTCTACCG GCTGATCTGC
GCCCATTACC TCGCGCAGTT CCTCCCGCAC CATGAGTTCG ACCGGACGGT AGCGCAGTTC
TCGTGCGGCA GTCAGTCGCT GGCGGCCGTG GGCAAGCAGA TCGCCGTCAC CGGCTGGCGT
GAGGTGCTGG CGACGCCGGG GCCGGACGAT GCCGATGGCG AGGATGCGCA GCGCAGCCAG
GTGCTGCCCG CCCTGCATGC GGGCCTGTCC TGCCCGGTCG GCAAGGTGGA TCTCAAGGCG
CTGAAGACGC TGCCGCCCAA ACCCTACACG CAGGGCGAGC TGATCAAGGC CATGAAGACC
GTCGCCAAGT TCGTGACCGA CCCGCGCCTG AAACAGAAGC TGCGAGATAC CACCGGCATC
GGCACCGAGG CGACACGCGC CAACATCATC AACGGTCTGA TCGGTCGCGG CTACCTGGTC
AAGAAAGGCC GCGCCGTCCG CGCTTCCGAC GCGGCATTCA CGCTCATCGA CGCGGTGCCC
TCGGCCATCG CCGACCCCGG CACCACGGCG GTGTGGGAGC AGGCGCTCGA CATGATCGAG
GCCGGCCAGA TGGCGCTGGA CACCTTCATC GAGAAGCAGT CCGTGTGGGT CGGCCAGCTC
GTGCAGCAGT ACCGCGGCGC GACGCTCTCG CTCAAGCTGC CGCCGGCGCC GGCCTGCCCG
CAGTGCGGCG CACCGATGCA GCAGCGCACG GGCAAGAGCG GCGCGTTCTG GTCCTGCTCG
CGCTACCCGG ACTGCAAGGG CACGTTGCCG CTCGAGTCCC CGACGGGCCG GCGCAGCGCA
CCGCGCAAGC GGCGCGCTGC CTCCAAGGCG TCCTGA
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| Protein sequence | MRVFLCEKPS QGKDIARVLG AVQRGNGCYS GAGVVVTWCI GHLVEAVPPE GYGEQYKRWA
IEQLPILPER WRVEPKAATA AQFKVVQQLV AKAGELVIAT DADREGEMIA REIIDLCGYR
GPIQRLWLSA LNDASIRKAL GALKPSAETL PLYFSALARS RADWLIGMNL SRLFTLLGRQ
AGYTGVLSVG RVQTPTLKLV VDRDREIARF VSMPYWAVDV LLSHAGQSFT ASWIPPEGST
DAAGRCLQQP VAQQAADRIR AARDAQVVSV DTERVREAPP LPFDLGTLQE VCSKQLGLDV
QETLDIAQAL YETHKATTYP RSDSGYLPES MLAEVPTVLD SLVKTDPSLR PLIERLDRQQ
RSRAWNDGKV SAHHGIIPTL EPANLSAMNE KELAVYRLIC AHYLAQFLPH HEFDRTVAQF
SCGSQSLAAV GKQIAVTGWR EVLATPGPDD ADGEDAQRSQ VLPALHAGLS CPVGKVDLKA
LKTLPPKPYT QGELIKAMKT VAKFVTDPRL KQKLRDTTGI GTEATRANII NGLIGRGYLV
KKGRAVRASD AAFTLIDAVP SAIADPGTTA VWEQALDMIE AGQMALDTFI EKQSVWVGQL
VQQYRGATLS LKLPPAPACP QCGAPMQQRT GKSGAFWSCS RYPDCKGTLP LESPTGRRSA
PRKRRAASKA S
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