Gene Tmz1t_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0890 
Symbol 
ID7084748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp984962 
End bp985432 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID643697913 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002354553 
Protein GI217969319 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.114761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGTC GTACCGCGCT CGACCTGTGG GTCGGCCTCT TCGTGGCGAT CGGCTTTGCC 
GCGCTGGTGT TCCTCGCCAT GAAGGTCGGC AATTTCTCCG GCCTCGACGG CGCCGAGACC 
TATCGCGTCG AGGCCCCCTT CGACAACATC GGCGGGCTCA AGGTGCGCGC GCCGGTCAAG 
AGCTCCGGCG TCCTCGTGGG CCGGGTCGCG GTGATCCGCT TCGATCCCGC GATCTACCGC 
GCGGTGGTCG AGCTCGAGAT CGACAAGCGC TATGCGTTTC CCGCCGACAC CACCGCGTCC 
ATCCTCACCT CCGGCCTGCT CGGCGAGCAG TACGTGGGGC TGGAGGCCGG TGCCGACACC 
GCGATGCTCA AGGGTGGCGA CCGCGTGCTG ATCACGCAGT CCGCGGTGGT GCTGGAGAAA 
CTCATCGGCC AGTTCATGTT CGACCGCGCC GCCGACGCGC CCGCCCAGTA G
 
Protein sequence
MMSRTALDLW VGLFVAIGFA ALVFLAMKVG NFSGLDGAET YRVEAPFDNI GGLKVRAPVK 
SSGVLVGRVA VIRFDPAIYR AVVELEIDKR YAFPADTTAS ILTSGLLGEQ YVGLEAGADT 
AMLKGGDRVL ITQSAVVLEK LIGQFMFDRA ADAPAQ