| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0798 |
|---|
| Symbol | |
|---|
| ID | 7084190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 879856 |
|---|
| End bp | 881538 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643697822 |
|---|
| Product | nitrite and sulphite reductase 4Fe-4S region |
|---|
| Protein accession | YP_002354463 |
|---|
| Protein GI | 217969229 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAAT ACGACGAACA CGACCAGCGC CTGCTCGACC AGCGCGTCGC CCAGTTCCGC
GACCAGATGC GGCGTCACCT GGCCGGCGAG CTCTCGGCCG ACGAGTTCCG TCCGCTGCGC
CTGCAGAACG GGCTGTACAT CCAGCGCCAC GCGCCGATGT TCCGCATCTC GGTGCCCTAC
GGCCACCTCG CCAGCCGCCA GCTGAGGAAG CTCGCCCACC TCGCGCGCAG CTACGACCAC
GGCTACGCCC ACTTCACCAC CCGCACCAAC GTGCAGTTCA ACTGGCCGAA GCTGGAAGAC
GTGCCGGAGA TGCTCGCCGA ACTGGCCAGC GTGCAGATGC ACGCCAACCA GACCTCGGGC
AACTGCATCC GCAACATCAC CGCCGACCCC TTCGCCGGCG TGGCCGCCGA CGAGGTCGCC
GATCCGCGCC CCTTCGCCGA GATCCTGCGC CAGTGGGCGA CCTACAACCC GGAATTCGCC
TTCCTGCCGC GCAAGTTCAA GATCGCCTTC AACAGCGCCG CCGAAGACCG CGTGGTGCTG
CGGGTGTACG ACATCGGCCT CGACCTGGTC CGTAACGAGG CCGGCGAGCT CGGCTTCCGC
GTGCTGGTGG GCGGCGGCCT CGGCCGCACC CCGATCCTGG GCGAGGAGAT CAAGCCCTTC
CTGCCCTGGC AGCACCTGAT CAGCTACTGC GAGGCCATCC TGCGCGTCTA CAACCGCTGG
GGCCGCCGCG ACAACCTGTG GAAGGCGCGC ATCAAGATCC TCGTCAAGGC GCTCGGGCCG
GAAGAGTTCG GCCGCCAGGT GGAGGAAGAA TGGGCCAACG GCAAGGACGG CCCCAACACC
ATCACCGCGG CGGAGCTGGC GCGCGTGTCG GCCCACTTCG CCCCGCCTGC CTACGAGACC
CTGCCCGCGC AGGACGCCGC CTTCGACGAA CTCCTCGCCG GCAACAAGGC CTTCGCCACC
TGGGTCAAGC GCAATGTGCG CGCCCACCGC CAGCCCGGCT ACGCGGCGGT GGTCCTGTCG
CTGAAGAAGA CCGGCACCGC CCCGGGCGAC GTCACCGCCG AGCAGATGGA CCTGATCGCC
GATCTCGCCG ACCGCTTCAG CTTCGGCGAG GCGCGCATGC TGCACGAGCA GAACGTCGCG
CTCGCCGACG TGCGCCGCAC CGACCTCTTC GAACTGTGGC AGGCGGCGCG TGCCGCCGGC
CTGGCGACGC CGAACATCGG CCTGCTGACC GACATCATCT GCTGCCCCGG CGGCGACTTC
TGCAGCCTCG CCAACGCACG CTCGATCCCG ATCGCCGACG CCATCCAGCG CCGCTTCGAC
GACCTCGACT ACCAGCACGA CATCGGCGAG ATCGACCTCA ACATTTCCGG CTGCATGAAC
TCCTGCGGCC ACCACCACGT CGGCCACATC GGCATCCTCG GCGTCGATAA GAACGACGAG
GAGTGGTACC AGGTCAGCAT CGGCGGCACA CAGGGCAACG GCACCACGCT CGGCAAGGTG
ATCGGTCCGT CCTTCGCCCT CGACGAGATC GTGGGCGTGA TCGAGAAGCT GCTCGAAACC
TACGTCGAAC TGCGCCATGA GGACGAGCGC TTCATCGACA CCGTACAACG CGTCGGCACC
GAGCCCTTCA AGGCACGCGT GTATGCCGAC CGCCAGCCGC AAAGGAAAGC CGCCCATGTC
TGA
|
|---|
| Protein sequence | MYQYDEHDQR LLDQRVAQFR DQMRRHLAGE LSADEFRPLR LQNGLYIQRH APMFRISVPY
GHLASRQLRK LAHLARSYDH GYAHFTTRTN VQFNWPKLED VPEMLAELAS VQMHANQTSG
NCIRNITADP FAGVAADEVA DPRPFAEILR QWATYNPEFA FLPRKFKIAF NSAAEDRVVL
RVYDIGLDLV RNEAGELGFR VLVGGGLGRT PILGEEIKPF LPWQHLISYC EAILRVYNRW
GRRDNLWKAR IKILVKALGP EEFGRQVEEE WANGKDGPNT ITAAELARVS AHFAPPAYET
LPAQDAAFDE LLAGNKAFAT WVKRNVRAHR QPGYAAVVLS LKKTGTAPGD VTAEQMDLIA
DLADRFSFGE ARMLHEQNVA LADVRRTDLF ELWQAARAAG LATPNIGLLT DIICCPGGDF
CSLANARSIP IADAIQRRFD DLDYQHDIGE IDLNISGCMN SCGHHHVGHI GILGVDKNDE
EWYQVSIGGT QGNGTTLGKV IGPSFALDEI VGVIEKLLET YVELRHEDER FIDTVQRVGT
EPFKARVYAD RQPQRKAAHV
|
|---|
| |