Gene Tmz1t_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0748 
Symbol 
ID7083977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp829164 
End bp830345 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID643697773 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002354415 
Protein GI217969181 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTGC CCAGCCTGAA CTTCAACCTC GGCGAGACCA TCGACGCCCT GCGCGACACC 
CTGCAGGCCT TCTGCGCCGC CGAGATCGCC CCGCGCGCGG CCGAGATCGA CCGCGTCAAC
GAGTTCCCCG CCGACCTGTG GAAGAAGCTC GGCGACCTCG GCGTGCATGG CATGACGGTG
AGCGAGGAGT ACGGCGGCAC CGACATGGGC TACCTGGCGC ACATCGTGGC GATGGAGGAG
ATCTCGCGCG CGTCCGCCTC GGTGGGCCTC TCGTACGGCG CGCACTCCAA CCTGTGCATC
AACCAGATCC GCCGCAACGG TACCGAGGCG CAGAAGCAGA AGTACCTGCC CAAACTGATC
TCGGGCGATC ACGTGGGCGC GCTGGCGATG TCCGAACCCA ACGCCGGCTC CGACGTGGTG
AGCATGAAGC TGCGCGCCGA CCGCAAGGGT GACCGCTTCA TCCTCAACGG CAGCAAGATG
TGGATCACCA ACGGCGGCGA CGCCGACACC CTGGTGGTCT ATGCCAAGAC CGACATCGCC
GCCGGCCCCA AGGGCATCAC CGCCTTCATC ATCGAGAAGG GCATGAAGGG GTTCAGCCAC
GGCACCCACC TCGACAAGCT CGGCATGCGC GGCTCCAACA CCTTCCCGCT GTTCTTCGAC
GACGTCGAGG TGCCGGCGGA GAACGTGCTC GGCGGCGAGG CCAACATCGG TCGCGGCGTG
CAGGTGCTGA TGAGCGGCCT GGACTACGAG CGCGCGGTGC TCTCCGGCGG CCCGCTCGGC
ATCATGGCGG CGTGCATGGA CGTGGTGGTG CCCTACCTGC ACGAGCGCAA GCAGTTCGAC
ACCCCGATCG GCGAATTCCA GCTCATGCAG GGCAAGGTCG CCGACCTGTA CTCCACCTGG
AGCGCCTGCC GCGCCTATGC CTACGCCGTG GGCCAGGCCT GCGACCGCAC CGACCATGCG
CGCACGCTGC GCAAGGACGC TGCCGGTGTG ATCCTGTACA CCGCCGAGAA GGCCACCTGG
ATGGCCGGCG AGGCGATCCA GACCCTCGGC GGCGTGGGCT ACACCAACGA ATATGCCACC
GGCCGCCTGT GGCGCGACGC CAAGCTGTAC GAGATCGGCG CCGGTACCAG CGAGATCCGC
CGCATGCTGA TCGGCCGCGA ACTCTTCTCC GAGACCCGTT GA
 
Protein sequence
MNVPSLNFNL GETIDALRDT LQAFCAAEIA PRAAEIDRVN EFPADLWKKL GDLGVHGMTV 
SEEYGGTDMG YLAHIVAMEE ISRASASVGL SYGAHSNLCI NQIRRNGTEA QKQKYLPKLI
SGDHVGALAM SEPNAGSDVV SMKLRADRKG DRFILNGSKM WITNGGDADT LVVYAKTDIA
AGPKGITAFI IEKGMKGFSH GTHLDKLGMR GSNTFPLFFD DVEVPAENVL GGEANIGRGV
QVLMSGLDYE RAVLSGGPLG IMAACMDVVV PYLHERKQFD TPIGEFQLMQ GKVADLYSTW
SACRAYAYAV GQACDRTDHA RTLRKDAAGV ILYTAEKATW MAGEAIQTLG GVGYTNEYAT
GRLWRDAKLY EIGAGTSEIR RMLIGRELFS ETR