Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0724 |
Symbol | |
ID | 7083953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 807044 |
End bp | 809650 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643697750 |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_002354392 |
Protein GI | 217969158 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGCC CGGAAAAACA AGAACACGGT TTCGAGCTCA CCGACGAACA ACTCCGCCAG ATCGTCGCCG AGGCCGACAC GGGTGGGCGC AAGCCGACCG GATGGCCGGC GCGCCTCATC GTGCTGGTCG CACTGGCATG GTCCCTGATG CAGCTCTGGA TCGCCTCGCC GCTGCCGTTC TCGCTCGGCA TGTTCGTCTT CAACGACACC GAGGCGCGCT CGATCCACCT CGCACTGGCC GTGTTTCTCG CCTTTCTCGC CTACCCGGCA CTGAAGCGCT CTCCACGCGA CCGGATCCCG CTCGGGGACT GGGTACTTGC AGCGGTTGGG GCGTTCTGCA TGGGCTACCT GTTCCTCTTC TACAGGGAAC TGGCCGCCCG CCCCGGCCTG CCGACCACGA CGGACCTCGC GGTCGCCGTG TGCGGCCTGA TCCTGCTGCT CGAAGCCGCA CGCCGCGCAC TCGGCCTGCC CATGGTCGTG CTGTCGGTGG TGTTCATCGG CTACGTCTTT CTGGGCCCCT ACATGCCGGA GATGATCGCC CACCGCGGCG CCTCGCTGGC GAAGGGGATG AGCCACCTGT GGCTGACCAC CGAGGGCGTG TTCGGGGTGG CCCTCGGGGT ATCGACCAGC TTCATCTTCC TTTTTGTGCT GTTCGGCTCC CTGCTCGAGA CCGCGGGCGC CGGCAACTAC TTCATCAAGT CGGCGATCTC GCTGCTCGGG CATCTGCGCG GCGGCCCGGC CAAGGCCGCC GTGGTGGCTT CCGCGAGCAC GGGATTGATC TCCGGCTCCT CGATCGCCAA CGTCGTCACC ACCGGCACCT TCACGATCCC GCTGATGAAA CGCGTGGGGT ATGCGCCCAA GAAGGCGGCG GCGGTCGAGG CCGCGGCCTC GGTCGATGGC CAGATCATGC CGCCGGTCAT GGGCGCTGCG GCCTTCCTGA TGGTCGAGTA CGTGGGCATT CCCTACACCG AGGTCATCAA GCATGCCTTC CTGCCGGCGC TGATCTCCTA CATCGCGCTC TTCTACGTGG TGCACCTCGA GGCGCTCAAG GCCGACATCC GCGGGCTGCC GCGCCGGGTG ACGAAATCCG CCGGACATCG CCTGCTGTCC TTCGGCCTCA CCGTGTCGGG CCTGATCGTC CTTGCCGGGG CGGTCTATTA CGGCATGGGC TGGATCAAGG CGCTGGCAGG CGACGCCTCG GCGATCATCG TCGCGGTGCT CATGTTCGGC TGCTACATCG GCCTGCTGTG GTACGCGACG CGGCACCCCG AGCTGCACAT GGACGACCCC AGCAGCCCCC TGACCGAGCT GCCGGAGACC GGCCCGACGC TGAAGACGGG CCTGTACTAC CTGCTGCCGG TGGTCGCGCT GATCTGGAAC CTGATGGTGG AGGAGCTCTC GCCTGCGCTG TCGGCGTTCT GGGCGACCCT GTTCATGATC TTCATCCTGG TCACGCAGCG CCCGCTCAAG GCGATCTTCC GCAACACCGG CAACGTGGGT GAGGCAACCC GGCAGGGCTT CGCCGACCTC CACACCGGCC TGGTCACCGG GGCGCGCAAC ATGATCGGCA TCGGCATCGC GACCGCGACC GCCGGCATCA TCGTCGGCAC CGTCACGCTG ACCGGTGTCG GCCTGGTGCT CACCGAGTTC GTCGAGGCGG TGTCTGGCGG CAATCTGATG GTGATGCTGG TCATGGTCGC GGTCATCTGC CTGATCCTCG GCATGGGCCT GCCCACCACG GCGAACTACA TCGTGGTGTC GACCCTGATG GCGCCGGTCG TGGTCGAGGT CGGCGCGCAA AGCGGCCTGC TCGTCCCGCT GATCGCGGTG CATATGTTCG TCTTCTACTT CGGCCTGATG GCCGACGTCA CCCCACCGGT CGGCCTCGCC TCCTACGCCG CCGCGGGGAT CGCACGCTGC GACCCGATCG CTGCGGGCGT GCAGGCCTTC CTGTACTCGA TGCGGACGGC GATCCTGCCC TTCATGTTCA TCTTCAACAC CCAGTTGCTG ATGATCGGCG TCGATTCGGT GTGGCTGTTC GCCCTGACGG TATCGAGTGC GATCGTGGCG AACCTGATGT TCGCGGCGGC CACCCAGGGC TGGTTCATCA CCCGCAACCG CGTGCACGAG TCGATCCTGC TGTTGCTGGT GACCTTCACG CTGTTCCGCC CGGGCTTCTG GATGGACATG CTGTACCCAC CCTATCAGGA GCTGCCGGCC TCGGAGCTGA CCCGCCTGGT CGAGGAGGCT CCACGCAACG ACAACCTGCG CATCTGGGTG GAGGGGATTT CGCTCGAGGG CGAGGAAGTC TCGAAAGGCA TGCTGCTTCC GCTCGGCGAC ACTGCGCCCA GCGCCAGGGA GCGCCTGGGC AGGGTCGGGC TGACCTTGAT GAGCCTTGGA GATGAAGTCC AGGTCGCCGC GGTGCGCTTC GGGAGCCAGA GCGAGAAGCT GGGGCTGGAG CAGGGGTACA AGATCGCCCG CATCGAGGTA CCGTCCGTCG ACCGTCCGTC GAGGGAATGG ATGTTCGTGC CCGCGCTCGC GCTGCTGGGC TTCGTCTGGT TCGCGCAGAC TCGCCGCGCG CGACGGCAGC AGCCCACGCG CGCCTGA
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Protein sequence | MASPEKQEHG FELTDEQLRQ IVAEADTGGR KPTGWPARLI VLVALAWSLM QLWIASPLPF SLGMFVFNDT EARSIHLALA VFLAFLAYPA LKRSPRDRIP LGDWVLAAVG AFCMGYLFLF YRELAARPGL PTTTDLAVAV CGLILLLEAA RRALGLPMVV LSVVFIGYVF LGPYMPEMIA HRGASLAKGM SHLWLTTEGV FGVALGVSTS FIFLFVLFGS LLETAGAGNY FIKSAISLLG HLRGGPAKAA VVASASTGLI SGSSIANVVT TGTFTIPLMK RVGYAPKKAA AVEAAASVDG QIMPPVMGAA AFLMVEYVGI PYTEVIKHAF LPALISYIAL FYVVHLEALK ADIRGLPRRV TKSAGHRLLS FGLTVSGLIV LAGAVYYGMG WIKALAGDAS AIIVAVLMFG CYIGLLWYAT RHPELHMDDP SSPLTELPET GPTLKTGLYY LLPVVALIWN LMVEELSPAL SAFWATLFMI FILVTQRPLK AIFRNTGNVG EATRQGFADL HTGLVTGARN MIGIGIATAT AGIIVGTVTL TGVGLVLTEF VEAVSGGNLM VMLVMVAVIC LILGMGLPTT ANYIVVSTLM APVVVEVGAQ SGLLVPLIAV HMFVFYFGLM ADVTPPVGLA SYAAAGIARC DPIAAGVQAF LYSMRTAILP FMFIFNTQLL MIGVDSVWLF ALTVSSAIVA NLMFAAATQG WFITRNRVHE SILLLLVTFT LFRPGFWMDM LYPPYQELPA SELTRLVEEA PRNDNLRIWV EGISLEGEEV SKGMLLPLGD TAPSARERLG RVGLTLMSLG DEVQVAAVRF GSQSEKLGLE QGYKIARIEV PSVDRPSREW MFVPALALLG FVWFAQTRRA RRQQPTRA
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