| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0598 |
|---|
| Symbol | |
|---|
| ID | 7084536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 675339 |
|---|
| End bp | 676547 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643697625 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_002354267 |
|---|
| Protein GI | 217969033 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAC CGCTCACCCA CGCCCGCCTC GCTTCGCTGC TGGCAGCCCT GTCCTCGATC
GGCCCGTTCG CGATCGATGC CTATCTGCCC GCCTTTCCGG CGATCGCGGC GGCGTTGGGC
GCGAGCCGGC TGGAGGTGCA GCAGACGCTG ACGATCTACA TGGTGGCGCT CGCGTCCATG
GTGCTATGGC ACGGCGCGCT CGCCGACCGT TTCGGGCGTC GCCGCGTGCT GGTCGCGTTG
ACGGTGGTGT TCGCGCTCGC CTCGCTGGTG TGCGCGCTGG CGCCGAGCAT CGAGTGGCTG
TGGTTCGGGC GCGCGCTGCA GGGGCTGAGC GGCGGCGCGG GCATCGTGGT CGGGCGTGCG
GTGGTGCGCG ACCTGCACGA GGGGCCGCAG GCGCAGCGCC TGATGTCGCG GGTGATGCTG
ATCTTCGCGC TCGCTCCGGC GCTGGCGCCG ATGCTGGGCG CGGGCCTGCT CGCGCTCGCA
GGCTGGCGGG CGATCTTCTT CTTCCTCGCC CTTTTCGGGC TCGCGCTCGC GTGGACGACG
TGGCGCTTCC TGCCCGAGAC GCTCGCCGAG GAGGACCGCC AGCCGCTGCA TCCGCGGCCG
CTGCTGCGCG CCTACCTGGC GATCTTCCGC CACCCGGCCT TCATGTTGCT GGCGCTCGGG
GTGGCGCTGA ACTTCAACGG TTTCTTCCTC TACGTGCTCT CGGCGCCGGT GTTCATCCTC
GAGCATCTGA GCCTGGGCAG TGGCGGTTTC GTGTGGCTGT TCGGTCCGGC GGTGGGCGGG
ATGATGATCG GCTCGACGCT CTCCGAGCGC GTGGCCGGGC GCTGGTCGCC GGTGCGCACG
GTGGGCTTCG GCTTCGTCTT GATGTTCGCG GCGGTGGTGG CCAACGCCGC GGTGTCGGGC
CTCCTCGTCC CCGCGGTGCC GGTCTCGGTG CTGCCGATCG GCTTGTTCAG CTGCGGCATG
GCGGTGGCGA TGCCGAGCAT GAGCCTGCTC GGGCTGGAGA TCTTTCCCGA GCGCCGCGGA
ATGGCGTCGA GCTGCCAGAG CTTCCTGCAG ATCGGCTTCA ACGCGGCAAG CTCGGCGCTG
GTGGCGCCGC TGTTGTGGTC GAGTCCGCTC GGGCTGGCGT CGGGGATGGG CATGTTCACC
GCGCTCGGCC TGTGTGCGTG GATGGCATGG TGGCGGCTGG GCGCGCACGT GCGCGAGGGT
GCGGCGTAG
|
|---|
| Protein sequence | MIRPLTHARL ASLLAALSSI GPFAIDAYLP AFPAIAAALG ASRLEVQQTL TIYMVALASM
VLWHGALADR FGRRRVLVAL TVVFALASLV CALAPSIEWL WFGRALQGLS GGAGIVVGRA
VVRDLHEGPQ AQRLMSRVML IFALAPALAP MLGAGLLALA GWRAIFFFLA LFGLALAWTT
WRFLPETLAE EDRQPLHPRP LLRAYLAIFR HPAFMLLALG VALNFNGFFL YVLSAPVFIL
EHLSLGSGGF VWLFGPAVGG MMIGSTLSER VAGRWSPVRT VGFGFVLMFA AVVANAAVSG
LLVPAVPVSV LPIGLFSCGM AVAMPSMSLL GLEIFPERRG MASSCQSFLQ IGFNAASSAL
VAPLLWSSPL GLASGMGMFT ALGLCAWMAW WRLGAHVREG AA
|
|---|
| |