| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0543 |
|---|
| Symbol | |
|---|
| ID | 7085157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 612256 |
|---|
| End bp | 613536 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643697570 |
|---|
| Product | TRAP dicarboxylate transporter, DctM subunit |
|---|
| Protein accession | YP_002354212 |
|---|
| Protein GI | 217968978 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCC TGATCCTGTT CGGGCTGTTC GCCCTGCTGA TGATCGTGGG CGTGCCGATC
GGCATCTCGC TCGGCATCGC GGCGATGGCG GCGCTCGGCT ACGGCGGCGT GGTCGACAGC
AGCTATCTGG CGCAGAGCCT GGTGACCTCG ATCGACTCCT TCCCGCTGAT GGCGGTGCCC
TTCTTCATCC TCGCCGGCGA CCTCATGGGC CACGGCGGCA TCTCGCGCCG CCTGCTCGAA
GTCGGCGAGA TCCTGTTCGG CCGTTACACC GGCGGCCTCG GCCTGGTCGC CGTGGCCACC
TGCATGTTCT TCGCCGCGAT CTCGGGCTCG GGCCCGGCGA CGGTGGCGGC GATCGGCGGC
ATCCTGTTCC CGGCCATGCT CAAGCGCGGC TACGACCGCA ACTTCTCGGT CGGCCTGGTC
GCGTCCGCAG GCTGCATCGG CGTGGTGATT CCGCCCAGCA TCCCGATGGT GATCTACGCG
ACCTCCTCCG GCGCCTCGGT GTCCAGCCTC TTCCTCGCGG GGGTCGTCCC GGGAGTGCTG
ATCGGCGTGG TGCTGATGCT GATGAGCTGG TTCATCGCGC GCAAGGCCGG TTACCACGGC
ATCGAGCGCA GCTACACCGG CGCCGAGATC TTCCGCATCC TGTGGGACGC CAAGTGGGCG
CTGCTGGTGC CGGTGATCAT CCTGGGCGGC ATCTACGGCG GCATCTTCAC CCCGACCGAA
GCCGCGGCGG TGGCGGTGGC CTACGGCTTC TTCGTCGGCG TTTTCGTCTA CAAGGACCTC
AAGCTCGCCG ATGTCTACAA AGTGCTGGCA CACTCCGCCC TGACCTCCGC GACGGTGATG
GTGATCGTCG GCACGGCGAC GGTGTTCGGC CGCGTGCTGG CGATCGAAGG CATCCCGGTC
AAGCTGGCCA ACGAGATCGT GGCCCTGACC AGCGATCCGA TCATGATCCT GCTGCTGATC
AACGTGCTGT TCCTGGTGGT CGGCTGCTTC ATGGAGACGC TGGCGGCGAT CATCATCCTG
ACCCCGATCC TGCTCCCGGT GGTGCTGAAG GTGGGCGTCG ATCCGGTGCA TTTCGGCATC
CTGATGATCG TCAACCTGGC GATCGGGATG GTCACCCCGC CGATGGGCAT CAACTTGTTC
GTCGGCTCGC GGGTCGGCAA CGCCCAACTG GAAGGCGTCA TTCGTGGCGC GACGCCCTTC
CTGCTGTCGA TGATCGTGGT GCTGCTGGTA TTGACCTACG TGCCGCAGAT CACCCTGTGG
CTGCCCAACC TGATGAAGTG A
|
|---|
| Protein sequence | MISLILFGLF ALLMIVGVPI GISLGIAAMA ALGYGGVVDS SYLAQSLVTS IDSFPLMAVP
FFILAGDLMG HGGISRRLLE VGEILFGRYT GGLGLVAVAT CMFFAAISGS GPATVAAIGG
ILFPAMLKRG YDRNFSVGLV ASAGCIGVVI PPSIPMVIYA TSSGASVSSL FLAGVVPGVL
IGVVLMLMSW FIARKAGYHG IERSYTGAEI FRILWDAKWA LLVPVIILGG IYGGIFTPTE
AAAVAVAYGF FVGVFVYKDL KLADVYKVLA HSALTSATVM VIVGTATVFG RVLAIEGIPV
KLANEIVALT SDPIMILLLI NVLFLVVGCF METLAAIIIL TPILLPVVLK VGVDPVHFGI
LMIVNLAIGM VTPPMGINLF VGSRVGNAQL EGVIRGATPF LLSMIVVLLV LTYVPQITLW
LPNLMK
|
|---|
| |