| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0153 |
|---|
| Symbol | |
|---|
| ID | 7085250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 177797 |
|---|
| End bp | 178747 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643697195 |
|---|
| Product | Auxin Efflux Carrier |
|---|
| Protein accession | YP_002353844 |
|---|
| Protein GI | 217968610 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAT TCCTCGAACT GCTCGACTTC TCCCTCGGGG TCACCGGGCC GATCTTCACG
CTGCTCGGCC TCGGCGTGCT GCTGCGTCGG GTCGGGCTGA TCACCGAGGG CTTCATCGCG
GCGGGCTCGC GGCTGGTGTT CGTGGTCGGC CTGCCGACCA TGCTCTTCGT CAACATCGCG
CGCACGCGCC TGGAGGACTC GGCGAGCGCC GGCATGCTGG TGTATGGCCT GGCGGCGACG
GTGGCGATCT GGCTGCTGAT GGAGTGGGTG GCGAGCTTCG TCGTGCAGCC CGAGCGCGAC
CGCGGCGTGG TGGTGCAGGG CGCCTTCCGC TCCAATTTCG GCGTGGTCGG CCTGGCCTAC
TGCGGCAACG CCTACGGCGA GGCGGGGCTG GCGATGGCCT CGCTCTACGT CGGCGTGCTC
ACCATCCTGG TGAACATCCT CGGCGTGATC ACGCTCAGCC GTTCGCGGCA CAGCAGCCAG
GGCCCGGGCA AGGTCCTGCG CGGCATCGCC ACCAATCCGC TGATCCTCGG CATCCTGCTC
GCGCTGCCGG TGTCGGCCTT CGCCCTCCCG CTGCCGGCGG TGGCGATGAA GTCGGCCGCC
TACATCGCCG ACATGACGCT GCCGCTCGCG CTGCTGTGCA CCGGCGCGAC GCTGGATTTC
CGCAGCCTGC GCAGCGAAGC CGGCAACACC GCGCTGGCCA CCTTCGGCAA GCTGGTGGCG
ATGCCGCTCG TGTTCACGCT CGGCGCATGG GCGGCGGGAT TCCGCGCCAT GGAACTCGGC
GTGCTGATGC TGATGGCGTC CTCGCCTTCG GCGGCGGCGA GCTATTCGAT GGTGCGGGCG
ATGGGCGGCA ACGCCACGCT GGCCGCCAAC ATCATCGCGC TGACCACGCT CGGCTCGCTC
TTCACCACCA GCGTCGGCGT CTCGCTCCTG CGTGGTGTCG GGCTGATGTG A
|
|---|
| Protein sequence | MSVFLELLDF SLGVTGPIFT LLGLGVLLRR VGLITEGFIA AGSRLVFVVG LPTMLFVNIA
RTRLEDSASA GMLVYGLAAT VAIWLLMEWV ASFVVQPERD RGVVVQGAFR SNFGVVGLAY
CGNAYGEAGL AMASLYVGVL TILVNILGVI TLSRSRHSSQ GPGKVLRGIA TNPLILGILL
ALPVSAFALP LPAVAMKSAA YIADMTLPLA LLCTGATLDF RSLRSEAGNT ALATFGKLVA
MPLVFTLGAW AAGFRAMELG VLMLMASSPS AAASYSMVRA MGGNATLAAN IIALTTLGSL
FTTSVGVSLL RGVGLM
|
|---|
| |