| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1870 |
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| Symbol | |
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| ID | 5297415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1855236 |
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| End bp | 1856252 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640770138 |
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| Product | succinate--CoA ligase (ADP-forming) |
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| Protein accession | YP_001307089 |
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| Protein GI | 150021735 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00455189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTT ATGAATTTGT GGGGAAACAG CTCTTTAAAG AACATGGTGT AAAAATTCCA
GAAGGTTATT TAGTAACTTC TAAAGATGAG TTAACCATAA AATTTCTTCC AGCTGTTTTA
AAAAGTCAAG TATTAGTTGG AGGGAGAATG AAAGCTGGTG GAATTCTCTT TGCAAATAAT
CAGAGAGAAT TTTATGATTA TGGAAATATT CTATTGAAAA AAAATATAAA AGGTGAAAAA
CCATACGGAA TATTAATTGA AAAAATGATT AATATAAAAA GGGAATATTA TTTATCAATG
TATATCGATA AATTGGAAAA AGATTTTATG ATACTCTTCT CAGAATATGG CGGAATAAAT
ATAGAAGAAA ACGCAGATAA AGTTATTAAA ATAAACTTTG ACAAATATAA AGTACTTCCC
AAAAAATTTC ACAAAATTAT TCTAACATTA TACAAACTCA TGAAAGAAAA AGATTTAACA
CTAATTGAAA TCAACCCTTT AGCCGAAACT TTAAATGGTG ATTTAATTGC ATTAGATGCT
GTATTACATT TAGATGACAA TTCTATTTTT AGACAAAAAT GGGCTAAACA ATTTTCCTCT
GAAACACAAC CTTTTCATTT CGTAAAACTA AATGGTGATA TTGGAATAAT CGGTTGTGGT
GCTGGAATTG TAATGGCTAC AATGGATGCC GTAACATTTT ATGGTGGAAA ACCAGCAAAC
TTCCTTGATC TTGGTGGTGG AGCAGATACC AAAACTACAA CTCTAGCACT CGAATATTTA
AAAAATCTTT CAATTAACAA AATAATAATG AATATCTTTG GTGGAATTAC AAAATGCGAT
GAAATTGCTC AAGCTATTGT CAGGTTTAAA CAAAAAAATC CTCAAATATC ACTATACGTT
AGATTAACTG GGACAAATGA AGAAATTGCT AAACAAATTT TAAAAAAATA CAATATTGAA
TTATTTAGCG ATATGTACGA AATGATTGAA TGTGCAGTAA AGGAGGAGAA AAAATGA
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| Protein sequence | MKIYEFVGKQ LFKEHGVKIP EGYLVTSKDE LTIKFLPAVL KSQVLVGGRM KAGGILFANN
QREFYDYGNI LLKKNIKGEK PYGILIEKMI NIKREYYLSM YIDKLEKDFM ILFSEYGGIN
IEENADKVIK INFDKYKVLP KKFHKIILTL YKLMKEKDLT LIEINPLAET LNGDLIALDA
VLHLDDNSIF RQKWAKQFSS ETQPFHFVKL NGDIGIIGCG AGIVMATMDA VTFYGGKPAN
FLDLGGGADT KTTTLALEYL KNLSINKIIM NIFGGITKCD EIAQAIVRFK QKNPQISLYV
RLTGTNEEIA KQILKKYNIE LFSDMYEMIE CAVKEEKK
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