Gene Tmel_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1795 
Symbol 
ID5297515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1779458 
End bp1780156 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content26% 
IMG OID640770063 
Productpeptidase A24A domain-containing protein 
Protein accessionYP_001307015 
Protein GI150021661 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGTATG TCTTAAATTT TATTTTAGGT GCTATATTTG GTAGTTTTTT GAATGTAATA 
TTGTTTAGAA GCGTGGAGGG ATTAAAAATT AATGATCCTC CACGTTCTTT TTGTCTCAAT
TGTAAAGTTA GTATCAAATG GTATGATAAT ATACCAATTT TAAGTTATAT ACTGCTTGGC
GGGAAATGTA GAAATTGTAA AACAAAAATA CCTATTAGAT ATTTTTTAGT TGAATTATTA
ATTGCTTTTT CTTTTACGTT TCATAGTTTG TTATTTGCAA AATTTGAATG TATACTTTTG
AATATATTTA TATTTTCAAC TGTTGTTGTA GCATATGTTG ATTTTAAAAT TATGATGATA
CCGGATTTTT CGTGGTGGCT TCTTTGGATA GTAAGTGTGT TAGATTTATT TAGAGATACG
CGTTTTTGGT ATTTGAGATT TGTTTCGTTG TTTATTGTAC TGAGTATTTT TTTAATTTTA
AAAAAGATAT ATGTAGAAGG TTTAGGTGAA GGTGATATAT ACTTAATTAC TCCCATTGCT
TTTATACTAA ATTTACCACT TTCAATCTAT CATCTTTTAC TTTCTTCGAT ATTAGCTTTG
ATTTTTTCTT TGGTTAATAA AAAGAAAATA GTTCCATTTG GGCCATTTAT ATCTATTTCG
GGATATGTAT TGTATGTTTT TATGTTAAAA TATTTTTGA
 
Protein sequence
MWYVLNFILG AIFGSFLNVI LFRSVEGLKI NDPPRSFCLN CKVSIKWYDN IPILSYILLG 
GKCRNCKTKI PIRYFLVELL IAFSFTFHSL LFAKFECILL NIFIFSTVVV AYVDFKIMMI
PDFSWWLLWI VSVLDLFRDT RFWYLRFVSL FIVLSIFLIL KKIYVEGLGE GDIYLITPIA
FILNLPLSIY HLLLSSILAL IFSLVNKKKI VPFGPFISIS GYVLYVFMLK YF