| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1795 |
|---|
| Symbol | |
|---|
| ID | 5297515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1779458 |
|---|
| End bp | 1780156 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640770063 |
|---|
| Product | peptidase A24A domain-containing protein |
|---|
| Protein accession | YP_001307015 |
|---|
| Protein GI | 150021661 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGGTATG TCTTAAATTT TATTTTAGGT GCTATATTTG GTAGTTTTTT GAATGTAATA
TTGTTTAGAA GCGTGGAGGG ATTAAAAATT AATGATCCTC CACGTTCTTT TTGTCTCAAT
TGTAAAGTTA GTATCAAATG GTATGATAAT ATACCAATTT TAAGTTATAT ACTGCTTGGC
GGGAAATGTA GAAATTGTAA AACAAAAATA CCTATTAGAT ATTTTTTAGT TGAATTATTA
ATTGCTTTTT CTTTTACGTT TCATAGTTTG TTATTTGCAA AATTTGAATG TATACTTTTG
AATATATTTA TATTTTCAAC TGTTGTTGTA GCATATGTTG ATTTTAAAAT TATGATGATA
CCGGATTTTT CGTGGTGGCT TCTTTGGATA GTAAGTGTGT TAGATTTATT TAGAGATACG
CGTTTTTGGT ATTTGAGATT TGTTTCGTTG TTTATTGTAC TGAGTATTTT TTTAATTTTA
AAAAAGATAT ATGTAGAAGG TTTAGGTGAA GGTGATATAT ACTTAATTAC TCCCATTGCT
TTTATACTAA ATTTACCACT TTCAATCTAT CATCTTTTAC TTTCTTCGAT ATTAGCTTTG
ATTTTTTCTT TGGTTAATAA AAAGAAAATA GTTCCATTTG GGCCATTTAT ATCTATTTCG
GGATATGTAT TGTATGTTTT TATGTTAAAA TATTTTTGA
|
|---|
| Protein sequence | MWYVLNFILG AIFGSFLNVI LFRSVEGLKI NDPPRSFCLN CKVSIKWYDN IPILSYILLG
GKCRNCKTKI PIRYFLVELL IAFSFTFHSL LFAKFECILL NIFIFSTVVV AYVDFKIMMI
PDFSWWLLWI VSVLDLFRDT RFWYLRFVSL FIVLSIFLIL KKIYVEGLGE GDIYLITPIA
FILNLPLSIY HLLLSSILAL IFSLVNKKKI VPFGPFISIS GYVLYVFMLK YF
|
|---|
| |