Gene Tmel_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1786 
Symbol 
ID5296913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1773001 
End bp1773648 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content28% 
IMG OID640770054 
Producthypothetical protein 
Protein accessionYP_001307006 
Protein GI150021652 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1563] Predicted subunit of the Multisubunit Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGAA TATTTTTATC TAGTTTTGCT GTGCTTGTTA CTATAATGAT ATTTTTTTCA 
AAGAATGTTT TTAATTCATT TTTATATAGG ACTTCTTTAA GTGTCTTAAT GGTTGCCATA
TATGCTGTTT ATTTTGCTCC AGACGTGGCT ATTACTGAGG CGATGCTTGG AGCACTATTG
GCAACTTTTA TTTATCTTCT ATCTTTTAAG ATTCATTCAA AGTTGAGAGT TGCAATAGTA
AAAATCCCTG TAATTGCTCA AAAATATCAA GACTCATACA TTGGTATTGT CCCGAGCATT
ATGGATGATT TTTCTAAATT GTACAATCAT AAAATTGAAT ATTTAGAGGT TGAAGATATT
GAAAAATGTA AGGAATTAGC ACAATCTGGG GAAGTGGATT TAGCAATTTC TTTTGATGGT
GATTTTAAAA TTTTGAGTAT TCCTTATTAC AATGTTAATG GAGTAGAAAT GAGTTATTTT
GAATTACTTG AGTTAGGTGA AAATTCCAAT GTTCATAAAA GTTCAAATAA AATACTTTAT
TTTACTTTTC CTGACAAAAA TTCCATTGTT TATTTGGAAT TTCAAGATTT TTACAATCAA
GAGTATATAA ATAATGTTTT AAAAAGATAC AAATTGGGAG GGATTTAA
 
Protein sequence
MIRIFLSSFA VLVTIMIFFS KNVFNSFLYR TSLSVLMVAI YAVYFAPDVA ITEAMLGALL 
ATFIYLLSFK IHSKLRVAIV KIPVIAQKYQ DSYIGIVPSI MDDFSKLYNH KIEYLEVEDI
EKCKELAQSG EVDLAISFDG DFKILSIPYY NVNGVEMSYF ELLELGENSN VHKSSNKILY
FTFPDKNSIV YLEFQDFYNQ EYINNVLKRY KLGGI