Gene Tmel_1720 details

Gene Information

• Locus tag: Tmel_1720
• ID: 5298460
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1705312
• End bp: 1705983
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640769992
• Product: P-loop ATPase-like protein
• Protein accession: YP_001306944
• Protein GI: 150021590
• COG category: [R] General function prediction only
• COG ID: [COG4928] Predicted P-loop ATPase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGACTTG CAGAAGTTAT AAGTTACATA GTGGACAAGC CACTTGAACC TGTAAGTGAA 
AATTTGCTGG TCAACAGAAC AACAGAAATC AGAAATTTGA ACAACATTAT AAAGCACCAT 
CCCATGGGAA TTTTCGGAGT AGCTGGTGAA ACTGGTATAG GAAAAACGAC GGTACTCAAT 
TTTATTGGAT GTGACAACGT TTTTTCAAGA CGTATTACAC TGACTTTCAG GGAATCTGTA 
GAAAGTATTT TGTACGATCT TCTGTACAAC CTTTCCAAAA ATTTGGAAAG CGATGAAAAG 
CTTTCGAAAC AGGCGCAAAA GATAAAGGAA TGGGTAGCCG AAGAGGTTTC AACAGTGAAA 
GGTTTTTCCC TTGGAATAAG CTTGTACGGT TCTGCAGGTG TTGGTACTCA AAAGGCACAA 
ACACCAAGGT TTAACTTTTT TGTTGCCAAA GAAAAACTTA TGGATTTGAT TAAAGAAATT 
GTCACAGTAA AAGGAAAATT TGTTCTCTTT ATTGATGAAC TTGACAAAGA AAGTAAAGAT 
GATGTACTTA AAATCGTTGA CACTTTGAAA AACGAATTGG TATTTGAAAA TGTGATCCTA 
ATAATGACAC TGCCGTATTC TATATACAGA GAATACAAAC AGGAAACCTG GAAAATGTCT 
TTAAGGACAT AA 

 

Protein sequence

MRLAEVISYI VDKPLEPVSE NLLVNRTTEI RNLNNIIKHH PMGIFGVAGE TGIGKTTVLN 
FIGCDNVFSR RITLTFRESV ESILYDLLYN LSKNLESDEK LSKQAQKIKE WVAEEVSTVK 
GFSLGISLYG SAGVGTQKAQ TPRFNFFVAK EKLMDLIKEI VTVKGKFVLF IDELDKESKD 
DVLKIVDTLK NELVFENVIL IMTLPYSIYR EYKQETWKMS LRT