Gene Tmel_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1702 
Symbol 
ID5298253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1687603 
End bp1688703 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content34% 
IMG OID640769974 
ProductABC transporter related 
Protein accessionYP_001306926 
Protein GI150021572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.935699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC TTGAGCTTAT AAATCTTTCA AAAAGATACG GTAAAAAAGT ATGGGGAGCA 
AAAGATGTTA ATTTGAAAGT TAACGATGGA GAGTTTATAG TTCTTTTAGG CCCTTCTGGA 
TGTGGAAAAA CAACAACGTT AAGGATGATT GCAGGGTTGG AAGAAGTAAC AGAAGGAAGG 
ATTTTGATTG ACAACCAGGA TGTAACTTAT TTAGAACCGC GAAAAAGGGA AGTTAGTATG 
GTGTTTCAAA GTTATGCTGT GTGGCCGCAT ATGACGGTTT ATGAAAATAT AGCATTTCCT 
TTGAAACTCA GAAAATTGCC TGAAAATGAG ATTGATGAAA CTGTTCACGA AGTCTCACAA 
ATGGTTAAAA TAGAAGAATA TTTAAGTAGG TATCCATCTC AACTTTCTGG AGGGCAAAGA 
CAAAGAGTTG CTCTTGCAAG AGCGCTTGCT GTAAAACCTA AAATCTTTCT TATGGACGAA 
CCTTTGTCTA ATCTTGATGC GAAATTGAGA GTAAAAATGC GGACAGAACT TAAGGCTATT 
CATCATAAAA CAGGTGCTAC TACAATATTT GTTACGCATG ATCAATCTGA AGCAATGTCT 
ATGGCAGATA GAATTGTTGT TATGAAAGAT GGTCACATTG AACAAGTAGG AACACCAGAT 
GATGTTTATT TCAATAGTGC GAATGTTTTT GTTGCTGGTT TTATCGGAAC ACCACCAACT 
AACTTTTTTG AAATGGAGGT AGTTCAAAAA AATCAAAAAT TATATTTAGA AAATCGGTAC 
ATTTCAATAC CTGTTATTGA AAAATTAAAC AAGATTATTG AAAAATATGG TAAGTCTCAT 
TTGATTGTTG GAATAAGACC AGAGAATTTA AAGATCACAG ATAATAAGTC TGAAGCAATT 
TTCACAGAAA AAATATTAGT TGTTGAACCA CAAGGTTCTC ACCAGATAAT AGCTATTGAA 
CTTGGTGAGC AAATTGTAAA AATTGTATCG CCTGCTTTTC CAAAATATAA TGCTGATGAA 
GTAATTCACG TAACACTCGA TTATGAACGT ATAATGTTAT TTGATATTGA TACTAAAAAA 
AGATTGGAGA TGAGCTTATG A
 
Protein sequence
MATLELINLS KRYGKKVWGA KDVNLKVNDG EFIVLLGPSG CGKTTTLRMI AGLEEVTEGR 
ILIDNQDVTY LEPRKREVSM VFQSYAVWPH MTVYENIAFP LKLRKLPENE IDETVHEVSQ 
MVKIEEYLSR YPSQLSGGQR QRVALARALA VKPKIFLMDE PLSNLDAKLR VKMRTELKAI 
HHKTGATTIF VTHDQSEAMS MADRIVVMKD GHIEQVGTPD DVYFNSANVF VAGFIGTPPT 
NFFEMEVVQK NQKLYLENRY ISIPVIEKLN KIIEKYGKSH LIVGIRPENL KITDNKSEAI 
FTEKILVVEP QGSHQIIAIE LGEQIVKIVS PAFPKYNADE VIHVTLDYER IMLFDIDTKK 
RLEMSL