| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1660 |
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| Symbol | |
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| ID | 5298127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1648018 |
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| End bp | 1648848 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640769937 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_001306889 |
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| Protein GI | 150021535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAA AAGTGGGATT TTTATACGCA GTTACTCAAA TTCATGCGGG AAAAGGCATG
GATTTAGGTG TTATTGATCA ACCAATTCAA AGGGAAATTC ATACAGGTTT CCCTATAATT
TCAGGAATAA AAGGAGCTTT AAGACATGAA ATAAACTTTG AAAACAAAGA AGAAATTTTT
GGTTCTGAGG CAAATAAAGA TAAAGAGAAT TCCAAACCTG GTGACATAGT ATTTTCAGAA
GTAAAAATTT TATTTTTTCC AGTTAGAAGT TTAAATAAAG GATTAGTTTG GATAACTTGT
CCTATGGTTT TAAGTAGATT AAAAACAGCA TTTAAAATTG TTGGGAATAA TGACTTATCT
AAAAAAATAG AAGATTTTTT GAAAAATATA AATCATAATG AAAAATACAC TACTTTTGAA
AAGGAAGAGG TTGTAAGTTT AGAAGAATAT TCTATAAAGC CAAAAAGGTC TGATAAATTA
ATTGAAATAG TTGAAAGTTT AAAGGAGATA GTTCCAGATG ATTATTTATC AAATATGTTA
ACAAAAAATG TAGTAGTTCT TAGTGAGAAA GATTTTACTT TTTTTGTAAG AAATGCAACT
GAAATTCTTC CAAGGGTTAG AATTGATAAA AGTACAAGAG TAGTTGCAAA GGGAGCATTG
TGGTATGAAG AATACTTACC ACAGGATACT GTAATGTTTT TTATTATTAA ATCTTTTACT
GACAATAGCG AATTACTTAA TTTTGTCTCT AAAAAAATTG ATGGAAATTA TATAAATATC
GGTGGAAAAA CAAGTGTAGG TAAAGGTTTT ACTTACATTA AATTATTGTG A
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| Protein sequence | MNGKVGFLYA VTQIHAGKGM DLGVIDQPIQ REIHTGFPII SGIKGALRHE INFENKEEIF
GSEANKDKEN SKPGDIVFSE VKILFFPVRS LNKGLVWITC PMVLSRLKTA FKIVGNNDLS
KKIEDFLKNI NHNEKYTTFE KEEVVSLEEY SIKPKRSDKL IEIVESLKEI VPDDYLSNML
TKNVVVLSEK DFTFFVRNAT EILPRVRIDK STRVVAKGAL WYEEYLPQDT VMFFIIKSFT
DNSELLNFVS KKIDGNYINI GGKTSVGKGF TYIKLL
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