Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1650 |
Symbol | |
ID | 5297591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1640173 |
End bp | 1640433 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 640769927 |
Product | CRISPR-associated Cas2 family protein |
Protein accession | YP_001306879 |
Protein GI | 150021525 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.405387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGTAA TAATGGTATA TGATGTTAAT AAAAAAAGAG TACAAAAAGT TTTAAAAACG GCAAGGAAAT ACTTAAAATG GGTGCAGAAA TCTGTATTTG AGGGCAAAAT AACGGAAAAG AATTTAAAAA AATTAAGAGA TCAATTATTG GAATTAATTA ATCAAGAGGA AGATTCTATA TATTGGTATA TAATGGAGCC TGAGTTTAAA CCCTATAGAA AAATATTGGG AAAATCGGAG AATATTTCAA ATCTAATTTA G
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Protein sequence | MYVIMVYDVN KKRVQKVLKT ARKYLKWVQK SVFEGKITEK NLKKLRDQLL ELINQEEDSI YWYIMEPEFK PYRKILGKSE NISNLI
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