| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1606 |
|---|
| Symbol | |
|---|
| ID | 5297100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1592327 |
|---|
| End bp | 1593010 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640769883 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001306835 |
|---|
| Protein GI | 150021481 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGAA AAAATAATAT CTTAAGGTTT AAAACAATTG AAAGTACTAA TAACTTTTTA
AAGGAAAATT ATGAAAAAGT GGAAAATGGT ACAGTTGTAG TTGCCGATAT TCAAACTAAA
GGTAGGGGAA GGCTGGGGAG AACTTGGGTA TCAAAAAAAG GAGGATTATG GTTTTCAATA
CTAATCAAAA AAGACATTAA AAAACCAAGT TTTTATACAA AATTGTCTTC AATATCAATT
ATATCAATAC TTAAAAGGTT AAAAATAAAC GCAAAAATAA AATGGCCAAA TGATATATAT
GTAAATTCAA AAAAACTTTC TGGTATATTA ACCGAAGCTG TTACAGTTAA CAATAACATA
AAATGTATTA TAATAGGTAT AGGTATAAAT GTGAATAACG AAACACCTGA AAATGGGGTA
TCGCTTTCAA ATCTTTTGAA AGAAAGGTTA TCTTTGGATT TTCTCCTTGA ACAATTTATA
AAAGAATTCA ATAAAAATTA TTATCATTAC AGAAACCTAC CATTTTTATT GAATCTTAAG
TGGAAAAAAA ATTTAACATT TAGAAAAAGA AATTTTGTAA ACGGATATAA AATTTTGAAA
ATTAAACCAG AATATCTTAT CGTAAAAAAA GGCAAAATTA CGTTAAAAAT CAATAGTATT
CATAAATTAG AAAAGGAGCG ATAA
|
|---|
| Protein sequence | MLRKNNILRF KTIESTNNFL KENYEKVENG TVVVADIQTK GRGRLGRTWV SKKGGLWFSI
LIKKDIKKPS FYTKLSSISI ISILKRLKIN AKIKWPNDIY VNSKKLSGIL TEAVTVNNNI
KCIIIGIGIN VNNETPENGV SLSNLLKERL SLDFLLEQFI KEFNKNYYHY RNLPFLLNLK
WKKNLTFRKR NFVNGYKILK IKPEYLIVKK GKITLKINSI HKLEKER
|
|---|
| |