Gene Tmel_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1375 
Symbol 
ID5298313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1377719 
End bp1378630 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content30% 
IMG OID640769648 
Producthypothetical protein 
Protein accessionYP_001306607 
Protein GI150021253 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.771097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTATA CATTTTCAGA AGATGTAAAA GGAGAGTTAT GTCATATAAA AGTTACTGAG 
ATAGAAGCAA AATCTGAACT ATCTGGTTTT TTAAAGTCTA AAGGTATTTT GATAAAAACC
TACAGGGGAT TGCATGTTAA ATTGGAAATA GGTTTTATCC CTGCTGCAAG AAGGGTAATG
AATTTAATGG GGATTGTTGA GGTTAACAAG GAAAAGTTGA CTTTAATAAA AAATAAATTG
AAAAAGAAGA GGGTACAAAT TTTTATACCA TTCTCTATTT TGGAAAAGCT CGAAGTAAGT
ATTCTGAGAG TTCCAAGCTA TGTATTTGAA GATTGGAATT GTTTTGCTGC TTTTTTAAGA
GGAGTGTTTG TTTCAAGTGG TTCAATAACG GATCCTGCAA AGAATTATCA TTTTGAAATA
ATATCTCATA ATGAAGAGTT TTTAAATACA ATTAAAAATT ATCTTAGTGA GAATTTAGGG
ATAAATGGTA AGGTGGCAAG ATTTAACAAC AATTTTAGAT TTTATGTTAA AAGAGCAAGG
GATATCATTG AATTGTTGAA TTTTTTAGGA GCACAAAGAA ATGCAAATAA GATGGAAAGA
ATGGTGAGTA CAAGAGAGGT AAAAGGGGAT TTAAATAGAA CAATAAATTT TATCGAGGCT
AATGCAAAAA GAGTGGCGGA TAGTAATGCA AAACAAATAA ATTTAATAAG TAGTCTAATA
GATAAATACG GAATGGATGT TTTACCTGAA GAATTAAAAC AGCTTGCGAT TTTAAGATTG
GAAAATGAGG ATTTAAGCTT GTCTGATTTA GGTAAGAAAT TTACTCCACC TCTTAGTAAA
AGTATGGTGT ATAACAGAAT AAGAAAGATC TTTAAAATTT ATGAAGATTT AGAAGGAAAA
AGGTTGGAGT GA
 
Protein sequence
MLYTFSEDVK GELCHIKVTE IEAKSELSGF LKSKGILIKT YRGLHVKLEI GFIPAARRVM 
NLMGIVEVNK EKLTLIKNKL KKKRVQIFIP FSILEKLEVS ILRVPSYVFE DWNCFAAFLR
GVFVSSGSIT DPAKNYHFEI ISHNEEFLNT IKNYLSENLG INGKVARFNN NFRFYVKRAR
DIIELLNFLG AQRNANKMER MVSTREVKGD LNRTINFIEA NAKRVADSNA KQINLISSLI
DKYGMDVLPE ELKQLAILRL ENEDLSLSDL GKKFTPPLSK SMVYNRIRKI FKIYEDLEGK
RLE