Gene Tmel_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1343 
Symbol 
ID5298333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1351023 
End bp1352012 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content32% 
IMG OID640769618 
Producthypothetical protein 
Protein accessionYP_001306577 
Protein GI150021223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.696789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGTT TTAAATTTGA TTTTAAAAAG CCGGATTTTT CATCAGGATA TATTTTAAAA 
TCAAAACGGT TTAGAGTTTC ATATATAAAG TTTCCTTCTC TTTATAAAGA ATGCGAGAAA
GGGACTGAGA CTGTAGAAGT TTATCTGTTT GAGCCAAAAA AAGATGTAGG CGGCTCTTTG
ATGATATTAC ATGGTCTTGG AACTAGTAAC ATACCATTTC TTTTATGGAT GGGGACGCAT
CTTGCAAATG CAGGACTTAG AACTGTAATA CCAATTTTAC CCGGTAATTT TACAAGAGTT
CCAAATAATT CCGTTAGTGG AAAGGATTAT TTTTCAACGG ATGTAAATCG TGCAACAAAA
TTTTGGGAGC ATGCGGTTGT TGATGTAATT AGTGTATTAA AGTTTTTTAA GGAGCTAAAA
TTATGGCATG AAAATAATTG TTTGCTGGGG TTTTGTTTAG GTGGGATGCT AGGTGTTATT
TTAAACGCTA TTACAGATGA TTTTAAAAAA ACAATACTTA TGACTACAGG AGGAGATATT
GCTACTTTGA TTTGGTATTC ACCAACTTTA GCGTTCATGA GAAGAGATAT TAAAAAGGGA
TTGGGTGGAG ATATAAGGGA TAAAGGGAAG TTTTTGAAGA GATTTGAAGA TGATATAAAG
AAGCTTAAAA AGTTTGAAAC TGTTGAGGAT ATGCAAAATA GTGATATCCA TCCATTTTTA
AAGGTTGATC CAATTGCTTA TGCAAAGTTT GTGAATAAAG AACGCATAAT ATTTATCGAA
GCCTTATTTG ACAAAGCGTT GCCAAAAAAA AGTAGAAAAC TCCTCTGGGA AATGTTGGGA
AAACCAAGAA GACATATTAT ATTTTCCGGC CATGTAACAT GGCTTCCCTT TCAATATTTT
TTGGCAAGAT TTATTTTAAA AGAAATGGAT GTAAATGAAT TTAGAAGGCA GGCAAGATTG
TTGGAAAAAA TAAAATACGA AGAAAAATAG
 
Protein sequence
MISFKFDFKK PDFSSGYILK SKRFRVSYIK FPSLYKECEK GTETVEVYLF EPKKDVGGSL 
MILHGLGTSN IPFLLWMGTH LANAGLRTVI PILPGNFTRV PNNSVSGKDY FSTDVNRATK
FWEHAVVDVI SVLKFFKELK LWHENNCLLG FCLGGMLGVI LNAITDDFKK TILMTTGGDI
ATLIWYSPTL AFMRRDIKKG LGGDIRDKGK FLKRFEDDIK KLKKFETVED MQNSDIHPFL
KVDPIAYAKF VNKERIIFIE ALFDKALPKK SRKLLWEMLG KPRRHIIFSG HVTWLPFQYF
LARFILKEMD VNEFRRQARL LEKIKYEEK