Gene Tmel_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1314 
Symbol 
ID5297449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1321834 
End bp1322625 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content27% 
IMG OID640769588 
Producthypothetical protein 
Protein accessionYP_001306548 
Protein GI150021194 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.62773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTAC ATGTATGTTG CGCACCTGAC CTTGTTGCAG CATACTTTCA TCTAAAAGAT 
AAAATTAAAT ATATATATTT TTACAACCCA AACATACATC CAAAAGGAGA ATATATAAAA
AGATTAAATG AAGTAAAAAA ATTAGCAAAA CTCTGGAATT TGAAAATGAT AGAAAGTAAA
TACAATCCAG ATGAATTTTT TCAATATGTT AAGGGTTTAG AAAATTTGGG GGAGAATTCG
GCACGGTGTG ATAAATGCAT TTATCTTAGA TTGCTAAACA CCGCAAACAC AGCAAAAAAA
CATAATTTTA CATCATTTGC CACAACTTTA ACAGGTTCGA GAAAAAAAAT TTTGGAAAAA
ATAAATAATA TTGGTAAAAT AGTAGGGGAA GAAGAAAAAG TTAAATACGT TGAAACACAT
TTTAGAAAAG GTATAGAATC TCACCTTGCT GCAAGATTTA TAAAAGAAAA TAAAATATAC
AGACAAAACT ATTGTGGATG TATATTTTCA AAAATTGAAA ATGAAGAAAA AATAAAAAAA
CTTAAAGAAA AGGCAAAAGA AAAACTTAAA GAAATGGGTT TAGAGTATCT ACAACCATTT
CCCGAAACCT TTAAGATAAC TAAAAGCTCT CCCAAAGAAA TTATTGAAAA TTTAAAAGAG
GTTCTAAAAC TAACAAGACC TAAGCTTCTA TATATAGATA CATACGTAAT GAAAAAATTT
AATCTAAAAG AAGGGTGGAA CAGATTGGGA AATTACAATC AAAAAATAAA GTTAATAAAG
GAGAGTCTAT AA
 
Protein sequence
MLLHVCCAPD LVAAYFHLKD KIKYIYFYNP NIHPKGEYIK RLNEVKKLAK LWNLKMIESK 
YNPDEFFQYV KGLENLGENS ARCDKCIYLR LLNTANTAKK HNFTSFATTL TGSRKKILEK
INNIGKIVGE EEKVKYVETH FRKGIESHLA ARFIKENKIY RQNYCGCIFS KIENEEKIKK
LKEKAKEKLK EMGLEYLQPF PETFKITKSS PKEIIENLKE VLKLTRPKLL YIDTYVMKKF
NLKEGWNRLG NYNQKIKLIK ESL