Gene Tmel_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1290 
Symbol 
ID5297025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1300105 
End bp1301052 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content28% 
IMG OID640769564 
Producthypothetical protein 
Protein accessionYP_001306524 
Protein GI150021170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA GAGGAAAACT TTTAAAGGTT TTATTGGCGT TTATAATTGC TATATTAGTT 
GTTTCGCTAA TTTTTGTGTT TTCCTATTTC AGTTTCTTAT TGAAAAATGT GTATGGTATA
GAAGATGGTG TGTTTTCATA TATTAAAAGT TATTCTGCTT ATTTATTAAA TAAAATTCCT
GTTTTGAACA AGTATATAAA ATATGAACCA TTGAAAGTCA ATGAACCCAA AAAATTTTTC
ACAGAAGTTT TAGATGAGTA TAAAAAAAAT ATTGAGGAGC TTATAAAGCA ATCTGAAAAG
AAATTAAAAC AAGCTGAGAA GTTAAGATCT GAAAACGAAC TTTTGTACAA CTCGCTTAAA
AGTATTGAGG AGAAATGGAA AGAAAGGAAA ATTCAAGAGG AATTATCACA AATTCAAGTT
TTTCAAACTT CAAAAAATTT AGATAAACTT GTTGAAATAT TTAAGAATGG AGATGCAAAT
GCATTAATTC CATTGATGAA TAGTGAAGAT ATAAATGTAG ACACACTGGC TGTGATTTTT
CAACAGTTAA GTCCAGATTT AAGAAGTGAA ATGGTTCAAG CTTTAGCAAG CGTTAACCCA
ACAAAAGCAG CTGCGGTAGT AAATAAGATA TATGATGTAA AAAGTATATT AAATGAAATT
GAGACGAAAT TAGAAGCATT GAGAAATAAC ATAAATAACC TGTATTCATT GCAGGCACAG
CTAGTTTCTT TAGAGGGATT TAATAAGGCT ATAAGAGGAT ATTTGTCTTC TTTAGATGAG
GAAGAAATAT ATTCAATGAT AAATTTGTAC AAAGATTCAC CAAGAATAGT TTATTATTTA
ATCTCCAATA TAGATATTTC CATTTCAAAA AAACTCTTAA GACGTTTAAA GAATGAAAAT
GAAAAGTTAT TTGTTGAGTT GATAAAACTT GGTGGTGGTA TTGAATGA
 
Protein sequence
MEKRGKLLKV LLAFIIAILV VSLIFVFSYF SFLLKNVYGI EDGVFSYIKS YSAYLLNKIP 
VLNKYIKYEP LKVNEPKKFF TEVLDEYKKN IEELIKQSEK KLKQAEKLRS ENELLYNSLK
SIEEKWKERK IQEELSQIQV FQTSKNLDKL VEIFKNGDAN ALIPLMNSED INVDTLAVIF
QQLSPDLRSE MVQALASVNP TKAAAVVNKI YDVKSILNEI ETKLEALRNN INNLYSLQAQ
LVSLEGFNKA IRGYLSSLDE EEIYSMINLY KDSPRIVYYL ISNIDISISK KLLRRLKNEN
EKLFVELIKL GGGIE