Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1290 |
Symbol | |
ID | 5297025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1300105 |
End bp | 1301052 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640769564 |
Product | hypothetical protein |
Protein accession | YP_001306524 |
Protein GI | 150021170 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAA GAGGAAAACT TTTAAAGGTT TTATTGGCGT TTATAATTGC TATATTAGTT GTTTCGCTAA TTTTTGTGTT TTCCTATTTC AGTTTCTTAT TGAAAAATGT GTATGGTATA GAAGATGGTG TGTTTTCATA TATTAAAAGT TATTCTGCTT ATTTATTAAA TAAAATTCCT GTTTTGAACA AGTATATAAA ATATGAACCA TTGAAAGTCA ATGAACCCAA AAAATTTTTC ACAGAAGTTT TAGATGAGTA TAAAAAAAAT ATTGAGGAGC TTATAAAGCA ATCTGAAAAG AAATTAAAAC AAGCTGAGAA GTTAAGATCT GAAAACGAAC TTTTGTACAA CTCGCTTAAA AGTATTGAGG AGAAATGGAA AGAAAGGAAA ATTCAAGAGG AATTATCACA AATTCAAGTT TTTCAAACTT CAAAAAATTT AGATAAACTT GTTGAAATAT TTAAGAATGG AGATGCAAAT GCATTAATTC CATTGATGAA TAGTGAAGAT ATAAATGTAG ACACACTGGC TGTGATTTTT CAACAGTTAA GTCCAGATTT AAGAAGTGAA ATGGTTCAAG CTTTAGCAAG CGTTAACCCA ACAAAAGCAG CTGCGGTAGT AAATAAGATA TATGATGTAA AAAGTATATT AAATGAAATT GAGACGAAAT TAGAAGCATT GAGAAATAAC ATAAATAACC TGTATTCATT GCAGGCACAG CTAGTTTCTT TAGAGGGATT TAATAAGGCT ATAAGAGGAT ATTTGTCTTC TTTAGATGAG GAAGAAATAT ATTCAATGAT AAATTTGTAC AAAGATTCAC CAAGAATAGT TTATTATTTA ATCTCCAATA TAGATATTTC CATTTCAAAA AAACTCTTAA GACGTTTAAA GAATGAAAAT GAAAAGTTAT TTGTTGAGTT GATAAAACTT GGTGGTGGTA TTGAATGA
|
Protein sequence | MEKRGKLLKV LLAFIIAILV VSLIFVFSYF SFLLKNVYGI EDGVFSYIKS YSAYLLNKIP VLNKYIKYEP LKVNEPKKFF TEVLDEYKKN IEELIKQSEK KLKQAEKLRS ENELLYNSLK SIEEKWKERK IQEELSQIQV FQTSKNLDKL VEIFKNGDAN ALIPLMNSED INVDTLAVIF QQLSPDLRSE MVQALASVNP TKAAAVVNKI YDVKSILNEI ETKLEALRNN INNLYSLQAQ LVSLEGFNKA IRGYLSSLDE EEIYSMINLY KDSPRIVYYL ISNIDISISK KLLRRLKNEN EKLFVELIKL GGGIE
|
| |