| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1222 |
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| Symbol | |
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| ID | 5297376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1235215 |
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| End bp | 1237065 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640769499 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001306461 |
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| Protein GI | 150021107 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0767368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA ATACAATTTC AAAAAAGGAA TTCTTTTCAC CAATAAGTGC TTGGAAATTT
CTCTTAAAAA AACCAGTTAC TATAAAAGTT CCGTATGTGA AAAGAGAAGC TGCCGAAAGA
TACAGGGGCT TTCACATAAA TGATTGGAAT GAATGTATAG GGTGTGGAAC ATGTTCTAAA
ATTTGTCCAA CTGATGCAAT AAAAATGGTT GAAATTGAAG ATTTGCCACA ACAATATGGA
GAAAAACCCC AAAGACCTGT TATTGATTAT GGAAGATGCT CATTTTGTGC AATGTGTGTT
GATATATGTA CAACTGGTTC ACTGAAAATG ACTAGGGAAT ATGTACATAT TTCGCCAAAT
CCAGAAGATT TTATCTTTGC CCCTACTGAA GGGGGAATTC ACGGGGTAAA AGATGTTCCA
GTAGGTTGGA CTAGAGATGA TGATTCTGAT CTTTTAGAAC TAGAACGTGT TGAAATGGGA
ATGATAGAAG GGGAAGAAAG GTCAAAATCG TTTATAGAAT ATGTAAAGGG ATACAGTAAA
GAACAGGCAA TGCACGAAGC TTCAAGATGT GTTGAGTGCG GAATATGTAC TGATAGATGT
CCTCAGCATA TGCAAATTCC AGAATATATA AAAGCTATTT GGAAAGATGA TTTAAAAGAT
GCATTAAGGT GGCTTTTAAA GGGTGATGAA AGTAATAATA TGGTTGGTGC CAACCCATTT
TCAGCGGTAT GTGGAAGGGT TTGTACTCAT AAATGTGAGG AAGCGTGTTC ACTAGGAAAT
CGTGGAGAGG CAATAGCTAT TAGATGGTTG AAAAGATATA TTGTGGACAA TGTACCTGAT
TATGAAAAAG TTCTTGAGGT AAATACTGTG AAAAAAGATA AAAAAGTTGC CATTGTTGGT
TCAGGGCCTG CAGGTCTTTC TGCGGCGTAC TTTTTGGCAA CCCTGGGATA TGAAGTTGAA
GTGTTTGAGT CATTATCGAA ACCCGGTGGG GTTATGAGGT ATGGAATACC GTCCTATAGG
TTGCCAGATG AGGCTTTAGA TAAAGATATT GCATTTATTC AAGCATTAGG TGTAAAAATC
CATGTAGGTG TTTCTGTGGG TAAAGATATT TCTCTTGAAA AATTGAGGGA AAAATACGAT
GCCGTATTTG TTTCCACAGG ATTTACCCTT GGACGTTCTA CAAAAGTTCC TGGAACAGAA
CATGAAGATG TGATTCAAGC TCTTCCACTT TTGAGAGAAA TAAGAGATTA TCTAAGAGGA
GAAGGACCAA AGCCGAAGAT ACCAAGAAGT TTGGTAGTTA TTGGTGGAGG TAACGTTGCA
ATGGATGTGG CACGTTCAAT GGCAAGACTT CAAAAGATGG AATATGGCAA AGTCGATGTG
AAGATAACAT CTCTTGAAAG AACATATGAA GAAATGCCAG CAGATATGGA AGAAATAGAA
GAGGGGTCAG AAGAAGGAGT GGCATTTTAT CCTGGATGGG GGCCGATGAA AATAGTAATT
GAAAATGATA AGGTTAAAGG TGTAGAGTTG AAGAAATGTT TGGAAGTGTT TGATGAAAAT
GGAAGATTTA ATCCAAGGTT CGATGAAAGC AATAAAATGG TTTTAGATGC GGATATGGTA
GTAGAGGCAA TTGGGCAAGC CCCAGATTAT GATTATTTAC CTGAAGAAGT TAAATCTAAG
ATTGAATTTG TAAGAGGAAG GTTGCTAACA AACGAATATA GACAAACGTC TGTTGAATGG
TTATTTGCAG GTGGAGATAT TGTGCATGGG CCAGATATAA TTCATGCAGT AGCTGATGGA
TACTGGGCCG CAAGAGGTAT TGATAAGTTT TTAAGTAAAG GGGGGAAATA G
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| Protein sequence | MKNNTISKKE FFSPISAWKF LLKKPVTIKV PYVKREAAER YRGFHINDWN ECIGCGTCSK
ICPTDAIKMV EIEDLPQQYG EKPQRPVIDY GRCSFCAMCV DICTTGSLKM TREYVHISPN
PEDFIFAPTE GGIHGVKDVP VGWTRDDDSD LLELERVEMG MIEGEERSKS FIEYVKGYSK
EQAMHEASRC VECGICTDRC PQHMQIPEYI KAIWKDDLKD ALRWLLKGDE SNNMVGANPF
SAVCGRVCTH KCEEACSLGN RGEAIAIRWL KRYIVDNVPD YEKVLEVNTV KKDKKVAIVG
SGPAGLSAAY FLATLGYEVE VFESLSKPGG VMRYGIPSYR LPDEALDKDI AFIQALGVKI
HVGVSVGKDI SLEKLREKYD AVFVSTGFTL GRSTKVPGTE HEDVIQALPL LREIRDYLRG
EGPKPKIPRS LVVIGGGNVA MDVARSMARL QKMEYGKVDV KITSLERTYE EMPADMEEIE
EGSEEGVAFY PGWGPMKIVI ENDKVKGVEL KKCLEVFDEN GRFNPRFDES NKMVLDADMV
VEAIGQAPDY DYLPEEVKSK IEFVRGRLLT NEYRQTSVEW LFAGGDIVHG PDIIHAVADG
YWAARGIDKF LSKGGK
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