| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1216 |
|---|
| Symbol | |
|---|
| ID | 5297518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1228957 |
|---|
| End bp | 1230309 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769493 |
|---|
| Product | NADH/ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_001306455 |
|---|
| Protein GI | 150021101 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCTC TTTTAGTTGC TATTCCATTA ATCTCTGCGT TTTTATTCGT GCCATTTAAA
GATAAGTCAA AATACATATT ACCATTTGTT ATTTTGTTGG ATTTAATAGT GTTATTTAAC
TTAGCTCCAG GTACAATTTC AGAAATGGGT GGCTGGAAAG CACCTTTTGG AATAGTTTTG
GTACTTGATT CTGCAAGTTT TTACACAGTA CTAGTTGTAA ATATTATCTT TTTATTGATT
TCATTTATGC CGCAAATCGC AGAAAGAAAC TATTCAATAA TTTTATTAAT ACTTTTAGGA
GCGTTAAATG GCTTAATTCT TACAGGGGAT ATTTTTAATT CTTTTGTATT TTTGGAAATT
ACTGCAGCAG CTGGATATAT AATTGCATCT ACTAAGAAAA ATTATTATGG AGCATTTAAA
TACCTAATTA TTGGTGGAAT TGCTGGTGGA TTTTATCTTC TTGGAGCAAT TTATGCATAT
TTAGGTACCG GCTCATTGAA TTTAGCCGAT ATAGCGATTA ATATAAATCA TTCTATTATG
CCATATGTAG CACTTTTGTT ATTTGTTGGA CTAGCAGTTG AGGCAAAAGT TTTGCCATTA
GCAGGATGGG TTCCAAGTGT TTATGCATCA GGTTCATCTT TAACACCAAC GGTTTTAGGT
ACCACTGTTA CTTTTTCTGT GATTTATCTC TTGGGAAGGA TTTTTATTAC TGTATTTAAT
GGTTATTTTT TAGATGTAAT TTATGTATTT GGACTTTTAA CTCTTATTCT TGCCGAAATT
GCCGCATTTA GACAAGAAAA ATTGTTAAAA GCTCTTGCTT TTTCTTCAAT TGCACAGGCA
GGTTTAGTGT TAAGTGTTAT TTCTCTTAAT ACCTTTAGTG CGTTAAATGC AGCATATTTT
CATCTCTTAA ATGATGTAAC CGCAAAATTA GTTTTATTTA TTGTAGCTGC AAGTGTTTCT
GGAAGTTTTA TGAAGAATAA AACGTTAGGG ATTACATTTA GTATTGCTTC CTTTTCTTTA
ATAGGATTCC CATTGTTTGC TGGTTTCAGG AGTAAATTGT TAATTTTAAA AAGTGCTTTT
GAGAAAGGTG ACTATTTATT ACCTATACTT TTGTTGATAG CTACTGTGAT TGAAATGGCG
TATCTTCTGA AGTGGAATGT AAAATTTTGG TATAGTAATG AAGATATAAA TAAGGAAATT
CCATGGAATA TAATGTTACT GGTGTTAATA GTTGCATTGT TTATCATTTA TATAGGAATA
TTCCCAGAAA TATATTTAAA AATTTCCAGA AGTATAGCGG AAGGTTTGAT AAATTCAGAG
GCATATGTAA CGACTATTCT GGGAGGGATG TAA
|
|---|
| Protein sequence | MIALLVAIPL ISAFLFVPFK DKSKYILPFV ILLDLIVLFN LAPGTISEMG GWKAPFGIVL
VLDSASFYTV LVVNIIFLLI SFMPQIAERN YSIILLILLG ALNGLILTGD IFNSFVFLEI
TAAAGYIIAS TKKNYYGAFK YLIIGGIAGG FYLLGAIYAY LGTGSLNLAD IAININHSIM
PYVALLLFVG LAVEAKVLPL AGWVPSVYAS GSSLTPTVLG TTVTFSVIYL LGRIFITVFN
GYFLDVIYVF GLLTLILAEI AAFRQEKLLK ALAFSSIAQA GLVLSVISLN TFSALNAAYF
HLLNDVTAKL VLFIVAASVS GSFMKNKTLG ITFSIASFSL IGFPLFAGFR SKLLILKSAF
EKGDYLLPIL LLIATVIEMA YLLKWNVKFW YSNEDINKEI PWNIMLLVLI VALFIIYIGI
FPEIYLKISR SIAEGLINSE AYVTTILGGM
|
|---|
| |