Gene Tmel_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1216 
Symbol 
ID5297518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1228957 
End bp1230309 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content31% 
IMG OID640769493 
ProductNADH/ubiquinone/plastoquinone (complex I) 
Protein accessionYP_001306455 
Protein GI150021101 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCTC TTTTAGTTGC TATTCCATTA ATCTCTGCGT TTTTATTCGT GCCATTTAAA 
GATAAGTCAA AATACATATT ACCATTTGTT ATTTTGTTGG ATTTAATAGT GTTATTTAAC
TTAGCTCCAG GTACAATTTC AGAAATGGGT GGCTGGAAAG CACCTTTTGG AATAGTTTTG
GTACTTGATT CTGCAAGTTT TTACACAGTA CTAGTTGTAA ATATTATCTT TTTATTGATT
TCATTTATGC CGCAAATCGC AGAAAGAAAC TATTCAATAA TTTTATTAAT ACTTTTAGGA
GCGTTAAATG GCTTAATTCT TACAGGGGAT ATTTTTAATT CTTTTGTATT TTTGGAAATT
ACTGCAGCAG CTGGATATAT AATTGCATCT ACTAAGAAAA ATTATTATGG AGCATTTAAA
TACCTAATTA TTGGTGGAAT TGCTGGTGGA TTTTATCTTC TTGGAGCAAT TTATGCATAT
TTAGGTACCG GCTCATTGAA TTTAGCCGAT ATAGCGATTA ATATAAATCA TTCTATTATG
CCATATGTAG CACTTTTGTT ATTTGTTGGA CTAGCAGTTG AGGCAAAAGT TTTGCCATTA
GCAGGATGGG TTCCAAGTGT TTATGCATCA GGTTCATCTT TAACACCAAC GGTTTTAGGT
ACCACTGTTA CTTTTTCTGT GATTTATCTC TTGGGAAGGA TTTTTATTAC TGTATTTAAT
GGTTATTTTT TAGATGTAAT TTATGTATTT GGACTTTTAA CTCTTATTCT TGCCGAAATT
GCCGCATTTA GACAAGAAAA ATTGTTAAAA GCTCTTGCTT TTTCTTCAAT TGCACAGGCA
GGTTTAGTGT TAAGTGTTAT TTCTCTTAAT ACCTTTAGTG CGTTAAATGC AGCATATTTT
CATCTCTTAA ATGATGTAAC CGCAAAATTA GTTTTATTTA TTGTAGCTGC AAGTGTTTCT
GGAAGTTTTA TGAAGAATAA AACGTTAGGG ATTACATTTA GTATTGCTTC CTTTTCTTTA
ATAGGATTCC CATTGTTTGC TGGTTTCAGG AGTAAATTGT TAATTTTAAA AAGTGCTTTT
GAGAAAGGTG ACTATTTATT ACCTATACTT TTGTTGATAG CTACTGTGAT TGAAATGGCG
TATCTTCTGA AGTGGAATGT AAAATTTTGG TATAGTAATG AAGATATAAA TAAGGAAATT
CCATGGAATA TAATGTTACT GGTGTTAATA GTTGCATTGT TTATCATTTA TATAGGAATA
TTCCCAGAAA TATATTTAAA AATTTCCAGA AGTATAGCGG AAGGTTTGAT AAATTCAGAG
GCATATGTAA CGACTATTCT GGGAGGGATG TAA
 
Protein sequence
MIALLVAIPL ISAFLFVPFK DKSKYILPFV ILLDLIVLFN LAPGTISEMG GWKAPFGIVL 
VLDSASFYTV LVVNIIFLLI SFMPQIAERN YSIILLILLG ALNGLILTGD IFNSFVFLEI
TAAAGYIIAS TKKNYYGAFK YLIIGGIAGG FYLLGAIYAY LGTGSLNLAD IAININHSIM
PYVALLLFVG LAVEAKVLPL AGWVPSVYAS GSSLTPTVLG TTVTFSVIYL LGRIFITVFN
GYFLDVIYVF GLLTLILAEI AAFRQEKLLK ALAFSSIAQA GLVLSVISLN TFSALNAAYF
HLLNDVTAKL VLFIVAASVS GSFMKNKTLG ITFSIASFSL IGFPLFAGFR SKLLILKSAF
EKGDYLLPIL LLIATVIEMA YLLKWNVKFW YSNEDINKEI PWNIMLLVLI VALFIIYIGI
FPEIYLKISR SIAEGLINSE AYVTTILGGM