Gene Tmel_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1195 
Symbol 
ID5297478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1215759 
End bp1216169 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content31% 
IMG OID640769472 
Productferric uptake regulator family protein 
Protein accessionYP_001306434 
Protein GI150021080 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.4932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT ATGCAAAAAT TTTAAAAACT CATGGAATTA GACCTACTAT ACATAGAGTT 
CAAATTTTGA AGTTTATTGT TGAGAGTAAA TCTCATCCAT CGGCAGATGA GATTTATGAA
AAGCTAAAGG ATAAGATACA CGCTATTTCA AGATCTACTG TATATAACAC AGTTAGTTTG
TTGAAAGAAA AAGGAGTTAT AGAGGAAGTT GTAACCCCTT CTTCGATAAG GTATGATTAC
AGTCTAGTGC CTCATAACCA TTTTTATTGT ATTAAATGCA AAAAGGTTTA TGATATATAC
GGGGCACTTG GTGCGTTGCC GAAAATAACC GAAGTAGATG GACATTTAGT AAAAAATATT
CAATATTGTT TGTACGGAAT TTGTAAAAAT TGTTTAAATG GAGGTGAGTA G
 
Protein sequence
MENYAKILKT HGIRPTIHRV QILKFIVESK SHPSADEIYE KLKDKIHAIS RSTVYNTVSL 
LKEKGVIEEV VTPSSIRYDY SLVPHNHFYC IKCKKVYDIY GALGALPKIT EVDGHLVKNI
QYCLYGICKN CLNGGE