| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1157 |
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| Symbol | |
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| ID | 5297185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1179956 |
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| End bp | 1180525 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769435 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001306397 |
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| Protein GI | 150021043 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCGATCAT TTATTGCTAT TGATATAACT AGTGAAGTTA GGAGCGTTGC TGAAGATGTT
ATATCAAAGC TAAAAAAGAT GGGTTTTAAG GCGTCTTGGG TTTCACCTGA GAATTTGCAC
CTTACATTGT TTTTTTTAGG GGAGATTGAC AAAGAAAAGG TGGAGCTATT AGCCGAGAAA
TTTCATAGGA GATTAATAGG TTTCCCAAGT TTTTCATTTA ACGTTAATGA GTTTGGTTTT
TTTAGGTTTA AGCATTTACC AAGGGTGTTC TTTTTGAAAG TAGAACAAAG TAAGATATTA
CAAACACTTT ATCTTGAAAT GCGTTCTGAA ATGAAAAAAT TACGTATATC CTTTGATGAT
AAAGGAAATT TTGTTCCGCA TATTACTTTA GGACGCCTTA AGTATAGTCC AGAGAATTGG
GAGGAGTTGG TAAAAGATAT TGATGTTCCC AAAATGGTAG TTCCTGTTGA TAAAGTAATT
ATTTATTCAT CTACTTTAAC ACCTAGTGGT CCTATTTACA AATGGATGTA TAGGGTAAAA
TTTGAAGGAG GGTTAGACAA AAATGAGTGA
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| Protein sequence | MRSFIAIDIT SEVRSVAEDV ISKLKKMGFK ASWVSPENLH LTLFFLGEID KEKVELLAEK
FHRRLIGFPS FSFNVNEFGF FRFKHLPRVF FLKVEQSKIL QTLYLEMRSE MKKLRISFDD
KGNFVPHITL GRLKYSPENW EELVKDIDVP KMVVPVDKVI IYSSTLTPSG PIYKWMYRVK
FEGGLDKNE
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