Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1057 |
Symbol | |
ID | 5296563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1085683 |
End bp | 1086243 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640769340 |
Product | hypothetical protein |
Protein accession | YP_001306302 |
Protein GI | 150020948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00111473 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGC TAATTAGAGG TTGTGGAGTA TTTTTTCTAA TAATAATTAT ATTTGCAACA ATAATATACT TTACATCTTC GAAAAAAGAA CTAGAGGAAA TGGGAATAGG AGAAATAAAA ACACTTCTTC AATACAAAGA AGCAGTAGAA AAAGAAGTGT CATGGGACAC ATTTAAAAAA TACACTTCAT TAAAATTCTT ATATGAATTA CGTAAAATGG ACTCCTCAAA TCCAGATATA TACATAGAAA AATTGGAAAA TTACAAAAGT AATATTAATA AACTAACTTC TCTTGTAATA AGACTAAAAA GCAAAATTGA TAACGAAGAG ATAAAGAAAT TAAACGATTT ATTTGAAAAA TACTTTAGAA TAACATACAA ATTTTCAGAA GATTTTATAA ATTACATCGA AAATATCACT AGTAGCATGA TGACATATTA CAGAAAAAAA CTGGATAAAA CATCAGATGA AATGGTTTCA ATGTTAGATA AAATAAAAGA TAGATACAAA TATATCATAG AATCACAAAA TGAAACAGAC ATATTGGAAA TATTAAAATA G
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Protein sequence | MKRLIRGCGV FFLIIIIFAT IIYFTSSKKE LEEMGIGEIK TLLQYKEAVE KEVSWDTFKK YTSLKFLYEL RKMDSSNPDI YIEKLENYKS NINKLTSLVI RLKSKIDNEE IKKLNDLFEK YFRITYKFSE DFINYIENIT SSMMTYYRKK LDKTSDEMVS MLDKIKDRYK YIIESQNETD ILEILK
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