| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1037 |
|---|
| Symbol | |
|---|
| ID | 5297111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1063982 |
|---|
| End bp | 1065082 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640769321 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001306283 |
|---|
| Protein GI | 150020929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0279414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTA TTGCTGCGAT TTTTCATTTT TTTGCGGATT TTTTCAATGC ATTTGTTAAA
CCATTAGCAC CATACTTTAT TGACAATTTG GGGATTGATA ACAAAACTTT TGCAAGTTTT
ATGGCACTTT TAGGGGGAGT AACTTCTTTG TTCCAAGTGT TTTTTGGGGC GTATTTTGAT
AACAAAAAAA GGGATGGGTT GTATATAACA ATTATTGTTT TGTTGGAGAT ATTTTTTGTG
ACCTTTTTGG GGATTGTTAA ATCTGTATTA TTATTTTTCA TGTTGGTTGT CATTATTCGG
ATGTTAAACT CCATTTTTCA CCCTATAGGT GCAAGCTTTG CGGGAAAAAG GGAAGAAGGA
AAACACGTTG CAATATTTTC CGTTGCAGGG ACTTTAGGTG CGGGAATTGC TCCTTTGTTC
ATAACTTCCT TTCAGGATTT ATTTGGCATA GAAAAGTTGT ATATTTTAAC TGTTACAATG
TCTGTTGTTC TTTTGATACT ATCAAGGAAA ATAATCGGTT ATGAAAAAAA GACTGTGAAA
AAAACCCTTT CTTTTAAAGG TGATATTTTA AAGTTGTGGC CTATATTTTT AGTTGTAGCG
TCAAGGAGCT TTTCGATGGA TATTTTCCAT ACGTATATTC CCATTTATGT AAATGAGATA
GGGAAGTCCT TAATTGTAGG TGGCTCTATA TTAACATTTG GAATGATGTT GGGTGTTTTT
ACGAATTTTT TTGGTACAAT TGTACTTGAA AAGACAAACG ATAAAATTAC AAATGCAATA
GGTTTTTTTG GGATGGGTAT TTTTGGACTT TTATTTGTTC TTGTATCGGA TATTTATTTT
AAAGTCTTTT CCTTTATTAT TTTTGACGGT TTTAGCTTTT TCACCATGTC TTCTAACATA
GTTTCGGCAC AAAAATTACT TCCCAATAAC AAAGCGCTTG CCTCTTCCAT TTCAATGGGT
TTTTCTTGGG CAGTTGGTAT TTTGTTATCA AGTGGTTATG CAGCTGTATT TGGGAATAAT
ACCATGTTTA TGTTTTTAAG TGCTAGTATA ATGCCTATTG TTACTGTTAT CGTATATCTA
ATATCTTTGC GGAGGGAATA A
|
|---|
| Protein sequence | MEFIAAIFHF FADFFNAFVK PLAPYFIDNL GIDNKTFASF MALLGGVTSL FQVFFGAYFD
NKKRDGLYIT IIVLLEIFFV TFLGIVKSVL LFFMLVVIIR MLNSIFHPIG ASFAGKREEG
KHVAIFSVAG TLGAGIAPLF ITSFQDLFGI EKLYILTVTM SVVLLILSRK IIGYEKKTVK
KTLSFKGDIL KLWPIFLVVA SRSFSMDIFH TYIPIYVNEI GKSLIVGGSI LTFGMMLGVF
TNFFGTIVLE KTNDKITNAI GFFGMGIFGL LFVLVSDIYF KVFSFIIFDG FSFFTMSSNI
VSAQKLLPNN KALASSISMG FSWAVGILLS SGYAAVFGNN TMFMFLSASI MPIVTVIVYL
ISLRRE
|
|---|
| |