Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0997 |
Symbol | |
ID | 5296616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1017540 |
End bp | 1018736 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640769281 |
Product | hypothetical protein |
Protein accession | YP_001306243 |
Protein GI | 150020889 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00223972 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAAAT ACTTTAATTA TATTGAAATC ATAGTTCTCA ACACAATCAT ATTCTTTATA GATATATTAT TTAAATACTA CGGATATGTT CTATCATATC CAAATCCTTA TTTTGTATTG AATATTTACA TTTCAATAAG ACATGGTATA AATCTTTTCT TTTTTTCCAC ATCTTTGAGC TTATTTTACT ATTTTACTTC ACTTTACATA CACTACAAAA TCAACATCTT TTCAGTGATA TTTTCATGGT CTGTTATGCG CATACCACTA ATTATCTTAT CAATAGGATT TCTAATAGGA TTTTTTAGAG ATATGTACAT CCAAAAAATA AACGAACAAG CAAATCAGAT AAAGATACTA AACGAAAAAA TTAAACGACT TAAAGAAAAT ATAAAGAAAT ACTCTTCATT AACGAAAGAC TTGCAAAACA AACTACTACT CGAAAATAAA GGTGTATCAC TATTTGTTGA TAAACTAAAG GAGATAGAAT TCAACAACCC AGAAGATATA TTCAACGAAG CAGTTGAACT TATCTCAGAC TTCGTAAATG CAATAACCGT CTCCATATAT ACAATCAGCA AAAACAATTT TTTAAGATTA AAAGTAAGAA AAGGTTCACA AATTCTTCCT AACTCATTTC CCATTGAAAA ATCAAAAATT ATTTCAACTG CAAATGAATT AGGCTTCTCA TCTGCAAGCG TTTTATATCT CTCAGATGAA AATGTTGACT TTTCAATGGA GCCGGTTATG GCCGCAAAAA TATCGCAAAA AAACAAAACT GTTGGCTTTG TAGTCATTGA AAACATTGAC CCAGAAAAGA TAAACAAAAA CACAGAAACC TATTTGAAGC TTTTATCAGA TTGGCTATCC AATCTTCTAT ATGTTTCATT GGAACTTGAA AAACAAACAA TAACAACTGA TGTAGAAAAG TTCAATTTAA TTTTCGAAAA AATAGATGAA AGATTTCGAA GATTCAAAAT TCCATACTCC TTTATTAAAA TATCTGTTTC CAAAGAATTC GAGGTAAACG AAATAAAAAA ATACATTAGA GAAACTGACT TCGTATTCTT TAACAAAGAA AAAAATGAAT TAAATATAAT CCTTACTTCT TGTAATTCTA AAGGTCTTGA ACGTGTCCTT GAAAAGATAA GGTTAGAAAA AAACATTAAA GTATTGGAGG CATATACAAA AGAATGA
|
Protein sequence | MQKYFNYIEI IVLNTIIFFI DILFKYYGYV LSYPNPYFVL NIYISIRHGI NLFFFSTSLS LFYYFTSLYI HYKINIFSVI FSWSVMRIPL IILSIGFLIG FFRDMYIQKI NEQANQIKIL NEKIKRLKEN IKKYSSLTKD LQNKLLLENK GVSLFVDKLK EIEFNNPEDI FNEAVELISD FVNAITVSIY TISKNNFLRL KVRKGSQILP NSFPIEKSKI ISTANELGFS SASVLYLSDE NVDFSMEPVM AAKISQKNKT VGFVVIENID PEKINKNTET YLKLLSDWLS NLLYVSLELE KQTITTDVEK FNLIFEKIDE RFRRFKIPYS FIKISVSKEF EVNEIKKYIR ETDFVFFNKE KNELNIILTS CNSKGLERVL EKIRLEKNIK VLEAYTKE
|
| |