| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0892 |
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| Symbol | |
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| ID | 5298128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 928676 |
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| End bp | 929632 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769171 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001306138 |
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| Protein GI | 150020784 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0266088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TTATTACTTA CAAAATACCT GATGCAGGCA TTAAAATGTT ACAAAAAAAA
TTTAAAATAG AAGTATACCA AGGTGAAAAG TTTTTAACAA AAAAAGAAAT GATGGAAAAA
GTTAAAAATG TAGATGCCGT CATTACCCAA TTAAGAGATC CTGTAGATAG GGAATTTATA
GATGCTGGAA AAAATTTAAA AATAATAGCA AATTACGCTG TGGGATATAA CAACATAGAT
GTTGAATACG CAAAGAAAAA GGGGATATAT GTAACAAATA CACCAGACGT TTTAACGGAA
GCAACAGCAG ATATTGCATG GGCATTAATT TTAGCAGTGG CAAGAAAAAT CATTCCAGCA
GACAAATTTG TAAGAGAAGG AAAATTTGAA GGGTGGAAAC CCCATCTCTT TCTTGGCCAT
GAAATATACG GAAAAACTAT TGGAATAATT GGAATGGGAA GAATAGGAAA GGCTGTAGCA
AGAAGAGCAA TGGGGTTTGG TATGAAAATA CTTTATCACA ACAGAAAAAA AGTAGATGAT
GACTATAAAT ACAATGCAAA ATACGTGGAA CTCGAAACCC TCTTAAAAGA AAGCGATTAC
ATCTCAATAC ACACTCCTTT AACAAAAGAA ACTTATCATT TACTAGATAG CGAAAAACTT
TCACTTTTAA AACCAACTTC TATACTTATT AACACAGCAA GGGGACCTGT GGTCGACGAA
AAGGCATTGT ATGAATTTTT AAGAGAAGGA AAGATTGCAG GTGCAGGTTT TGATGTCTAT
GAAAACGAAC CAAAATTAAC GTCTGGTTTG GAAAAATTAG ATAACGTAGT GTTGCTACCA
CACATTGGTT CAGCAACATA TGAAACAAGG GAAAAGATGT CAATAATGGT AGCCGAAAAT
GTAATAGATG CATTGGAAGG AAAAATTCCA AGAAATTTGG TGTGGGGTAA TGATTAA
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| Protein sequence | MKVFITYKIP DAGIKMLQKK FKIEVYQGEK FLTKKEMMEK VKNVDAVITQ LRDPVDREFI
DAGKNLKIIA NYAVGYNNID VEYAKKKGIY VTNTPDVLTE ATADIAWALI LAVARKIIPA
DKFVREGKFE GWKPHLFLGH EIYGKTIGII GMGRIGKAVA RRAMGFGMKI LYHNRKKVDD
DYKYNAKYVE LETLLKESDY ISIHTPLTKE TYHLLDSEKL SLLKPTSILI NTARGPVVDE
KALYEFLREG KIAGAGFDVY ENEPKLTSGL EKLDNVVLLP HIGSATYETR EKMSIMVAEN
VIDALEGKIP RNLVWGND
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