Gene Tmel_0669 details

Gene Information

• Locus tag: Tmel_0669
• ID: 5297072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 707766
• End bp: 708350
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640768949
• Product: flagellar basal body L-ring protein-like protein
• Protein accession: YP_001305918
• Protein GI: 150020564
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0165935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGAAGT TAATTCTCTA TTTGTTAATT TTATCAACGG TTATTTTTTC AAATTCTATA 
TATAATCCAA ATAGTAAGTT TGGAAATATA ATAGCAAGTA AAAGGGCTTC AAAAGTTGGT 
GATATTGTAA ATATACTGGT TTATGAGACT CCAAGGTTTT CTACGAGTTC CGAAATGGAT 
TCTTTTAAAA ACACTATATT AGGTGCTATA AATAGTGGAG CTAAAATTTT GGGGGCGGAT 
TTATCAGGTT TTTTGCCCGT TAAAGATTCT GATAAGTTGA AAAATTCAAA CAAAAGTCAA 
ACAAGTGTTA TTTTGCAAAT AACAGCAATA GTTAAAAATG TAGATGAATA TGGAAATTTG 
TATGTAGAAG GTAGAAAAAA TATAAAGGTG GGAAATGATT TAAGAGAGAT AATAATAACT 
GGATGGGTAA ATCCCGAGGT TATATCTCCA AAAAATACCG TAAATTCTAC AGATTTAATG 
GAAGCACAGA TTTGGGAAAA TGGAAAGGTA ATTTTTGAGG ATGATCCTAA TGAGGGAAGC 
TGGCTTGGAT TAATTCTTTC AACTATTGCA GATTTATTTA GATGA 

 

Protein sequence

MKKLILYLLI LSTVIFSNSI YNPNSKFGNI IASKRASKVG DIVNILVYET PRFSTSSEMD 
SFKNTILGAI NSGAKILGAD LSGFLPVKDS DKLKNSNKSQ TSVILQITAI VKNVDEYGNL 
YVEGRKNIKV GNDLREIIIT GWVNPEVISP KNTVNSTDLM EAQIWENGKV IFEDDPNEGS 
WLGLILSTIA DLFR