Gene Tmel_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0653 
Symbol 
ID5297800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp689202 
End bp690239 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content31% 
IMG OID640768933 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_001305902 
Protein GI150020548 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.278995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTGCG CCCTTATAAT GGCAGGAGGG AAAGGTGAAA GGTTTTGGCC CTATTCTACT 
GATGAAAAAC CAAAACAATT TATCAATCTA TTTGGCGAAA AGACAATGAT TCAACAAACT 
GTTGATCGCT TAGACGGATT TCTTCCTATA GAAAATATTT TTATTGTTAC AGGGGAAAAA 
TATGTAAATC TTGTAAAAAA ACAACTACCG AATTTACCAG AGAAAAATAT AATAGTAGAA 
CCTGAGGGGA GAAATACCGC TCCTTGTATT GCGTTATCTG CGTTTTATAT AAAAAAAATA 
TACGGTAATG TTAACCTTGC TGTATTTCCA GCAGATCATC TTGTAAGAGA TGTTGAGGTT 
TTTAGAAAAA CGTTATCTCT TTCCTTTGAA TTTGTTGAGG CAAAAGAGGA TGTTATAGTT 
ACACTGGGTA TAAAGCCAGA TAGGCCGGAA ACTGGATATG GATATATAAA ATTTTTGGGA 
GAAGATGTAA AGATTAACGA ATCCATTTTA AAGGTTGAAA GATTTGTGGA AAAACCGGAT 
AAATTAACTG CTGAAAGGTA TGTGAATGAA GGAAAGTATC TTTGGAATGC GGGAATTTTT 
GTCTGGAAAA TTGACACGAT ATTGAAAAAT ACTAAAGAAT TTTTACCAAA TACCTATGGT 
ATTTTAAAAA ATGTTTTTGA TAAAAAAGAC CTATATGAAG AGTTAAAAAT AGCATATAAA 
AAGGTTGATA AGATTTCAGT GGATTTTGGA ATAATGGAAC ATGCAAAAAA TATCTATGTT 
ATTCCTGTAG ATTTTGGTTG GGATGATGTG GGAAGTTGGA TAGCGGTTGA AAGGTACAGT 
GAGAAAGATG AAGATGGAAA CGTTATTTCT CAGAACATAC ATTATTTTGA TTCAAAGAGA 
AATATTGTGA AAAGCAAGAA AAAGACAATT TTAAACGGAG TAAATGACCT AGTAGTAATA 
GAAACAGATG AGTATTTAAT AGTATCACAT AAAGATAGTA TTTCTAAAAT AAAAGATATA 
AAAAATAAGA TAGAGTAA
 
Protein sequence
MNCALIMAGG KGERFWPYST DEKPKQFINL FGEKTMIQQT VDRLDGFLPI ENIFIVTGEK 
YVNLVKKQLP NLPEKNIIVE PEGRNTAPCI ALSAFYIKKI YGNVNLAVFP ADHLVRDVEV 
FRKTLSLSFE FVEAKEDVIV TLGIKPDRPE TGYGYIKFLG EDVKINESIL KVERFVEKPD 
KLTAERYVNE GKYLWNAGIF VWKIDTILKN TKEFLPNTYG ILKNVFDKKD LYEELKIAYK 
KVDKISVDFG IMEHAKNIYV IPVDFGWDDV GSWIAVERYS EKDEDGNVIS QNIHYFDSKR 
NIVKSKKKTI LNGVNDLVVI ETDEYLIVSH KDSISKIKDI KNKIE