| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0645 |
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| Symbol | |
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| ID | 5298373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 683202 |
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| End bp | 684194 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768925 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001305894 |
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| Protein GI | 150020540 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.669847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATTTAT GTATAAAGTT TTCTTGTTTT TCTCTTGACT TAAAACGAAA GATTTATGAG
AAATTGTCAT TTGAAATTTT TACTCGTTTT TTTGAAAGAA AAGAAGAGGA ATTAAAGAGA
TTATACAAAA CCTTTGATTA CATAACAAAC ATTTTGGAAG CAGACTCATG GTCTTTGCTT
CTTGTACCTC AAAATAAAAT GTGGAGATTT TTAATTTGGT CTCATGCGCT GGATGAAAAT
CCTTTGGAGA ATTTGGGAGA ATTTTTTCAA AGTCAAACAC CAAAGAATTT AAGGAAGATA
ATATATACAG CTTCTAGTTT TTATATAGAA GATGTAACAA AAGCAGATTG TTGGATTGAA
CTAAAAGATA TTCCTGTAAA ATCTTGGGTT GGTATACCAC TTGTGTATGA AGAACAGGTA
TATGCTATTT TGAATATTGA TTGGTATAGA AAGAGGAAAA AGAGAAAAAC AGACGATGCT
GTTTTTGATA CGACAAAAGA TGTATTATCG AAAATTTTGT ACGATTATTT AAAGTTATAC
GAGAGACTTG GTAATGTATA TAAAGATATT TTAACAGGCC TATATAACAG GCAGTATTTA
GAAGAGGTGT CTTGGGAAAG ATTTAGCCAT GTGTTATTTA TTGATTTGGA TAATTTCAAA
TCTGTTAACG ATAATTTTGG CCACCTTATT GGCGATGAGG TTTTGAAAAT AGTTACTGAG
AGAATGCAAA GGATTACAAA AAAGGATGAT TTGCTAATTA GATTTGGAGG GGATGAATTT
TTATTGTTTG TTAAATCTAC AGATGAAGGG ATAGAAAAAA TATCTGAGAG ATTAAAGAAA
GTTTTGTCAA GAAAGATAAA TATTGACGGT AGGAATATTG AAATAGGTTG CTCTGTTGGA
ATACAAAAAA TAGAAAAAGA ATTAGGTTTG GAGAAAATAA TTAGTTTAGC TGATAGGAAA
ATGTATGAAG ATAAAAACAA AAAATTAAAG TAG
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| Protein sequence | MYLCIKFSCF SLDLKRKIYE KLSFEIFTRF FERKEEELKR LYKTFDYITN ILEADSWSLL
LVPQNKMWRF LIWSHALDEN PLENLGEFFQ SQTPKNLRKI IYTASSFYIE DVTKADCWIE
LKDIPVKSWV GIPLVYEEQV YAILNIDWYR KRKKRKTDDA VFDTTKDVLS KILYDYLKLY
ERLGNVYKDI LTGLYNRQYL EEVSWERFSH VLFIDLDNFK SVNDNFGHLI GDEVLKIVTE
RMQRITKKDD LLIRFGGDEF LLFVKSTDEG IEKISERLKK VLSRKINIDG RNIEIGCSVG
IQKIEKELGL EKIISLADRK MYEDKNKKLK
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