Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0638 |
Symbol | rpsR |
ID | 5297761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 678768 |
End bp | 678995 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640768912 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001305887 |
Protein GI | 150020533 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000348226 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT ATAGAAGAAA AAAGAAACCA AAGGTTTGTA AGCTTTGTCA ATCAAAAATT GATTACGTTG ACTATAAAGA TGTAAAGCTA TTAAGGGAAT TTTTAACCGA AAAGGAAAAG ATTATTCCAA GAAGGGTCAC AGGGAATTGT GCAAAACATC AAAGAATGGT TAAAATAGCG ATTAAAAGAG CTAGACAGAT GGCGCTTTTA CCTTACGTGA AGTATTGA
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Protein sequence | MMKYRRKKKP KVCKLCQSKI DYVDYKDVKL LREFLTEKEK IIPRRVTGNC AKHQRMVKIA IKRARQMALL PYVKY
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