| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0629 |
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| Symbol | |
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| ID | 5297588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 670738 |
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| End bp | 671589 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768901 |
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| Product | HflC protein |
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| Protein accession | YP_001305878 |
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| Protein GI | 150020524 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TAATAACATT TTTAACAATT CTGGTGATTG TTATTATAAT ACTTTCCCTT
TCTATGTTTA TAGTTGATCA AACTCAGCAG GCGGTTGTTT TGAGATTTGG TCAAATAGTA
GAAGTTTATC CAGAAGCCGG TATTCATTTT AAGACACCGT TTGTGGATAA CGTAGTGAAG
TTTGAAAAGA GGATATTGTT GTATGATATA GAGCCAGAGA AAATAATTAC TTTAGATAAA
AAGACGTTAA TTGTGGATAC ATATGCACTT TGGAAAATAA AGGATGCCCG AAAATTTATT
GAGACAATGA AAACAATATC ACTTGCAGAA TCCAGAATAG ACGATATTGT ATATTCCCAT
ATAAGGAATG TTTTTGCAAA ACATACTTTT GATGAGATTA TATCAGACAA AAGGGAAGGA
TTTTTAAAAG AAGTAACGTT ACTTTCAAAA AACGATTTAG ATGATTTTGG TATAGAAGTT
ATTGATGTAA GGGTAAAGCA TGCAGATCTT CCAGCAGAAA ATGTACAAGC AGTTTACGAA
AGAATGAGGG CAGAAAGATA TAGTATAGCT GCCCAGATTA GAGCAGAAGG TCAGAAAGAA
GCCCAAAAAA TACGTGCTGA AGCGGATAAA CAAGTGGCTG TTATACTTGC TCAAGCCAAA
AGTGAGGCGG AGGCTATAAA AGGTACTGGC GAAGCAAGTG CAACTAAAAT TTACGCAGAA
GCATTTAAAA CAGACCCGGA ATTTTTTGAT CTATGGAGAA GTCTTAGTGC ATATGATGAG
ATATTTAAAA ATGGAACTAT AATTTTTGGA AAAGATTTGG AGATATTTAA GTACATTTTT
GGTGTAAAAT AA
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| Protein sequence | MKKLITFLTI LVIVIIILSL SMFIVDQTQQ AVVLRFGQIV EVYPEAGIHF KTPFVDNVVK
FEKRILLYDI EPEKIITLDK KTLIVDTYAL WKIKDARKFI ETMKTISLAE SRIDDIVYSH
IRNVFAKHTF DEIISDKREG FLKEVTLLSK NDLDDFGIEV IDVRVKHADL PAENVQAVYE
RMRAERYSIA AQIRAEGQKE AQKIRAEADK QVAVILAQAK SEAEAIKGTG EASATKIYAE
AFKTDPEFFD LWRSLSAYDE IFKNGTIIFG KDLEIFKYIF GVK
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